Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0090 |
Symbol | |
ID | 6373733 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 84605 |
End bp | 85177 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642682606 |
Product | methionine-R-sulfoxide reductase |
Protein accession | YP_001958554 |
Protein GI | 189499084 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase |
TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.645705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAGTA CTGTCAGATG TCTTAAAGCT CCACAAGCAG TGCTTTTTCT TTTGCTGATG CTTCCAGCTC TACTGGCAGG TTGCGGCGGA GCCACCTTTC CTGAAAACGA AAAGGATGAT TCCATGATTT CAAAACAGGA AAAACCGGGT AACCCCTACT ATTCGAGAAC AGATACAACA ACGCTCGATC TGCCGGATTC GGTCTGGGCA AAGGTCTTGA CGAAAGAGGT CTACCGGGTC GCACGGCAAA AAGAGACCGA ACAGGCGTTT TCAGGGAAAT TCCTGGATTT TGAAGGCAGG GGGAGCTATT TTTGTGCGGC GTGCGGTAAT GCGTTGTTTC GCTCAGATGC GAAATTTGCC GATACCTGCG GCTGGCCGAG TTTTTTCGAG CCGGTACGCG AGAAGAGTAT TTTCTATCAG CCTGACACCT CGCATGGGCT GGTGAGGACA GAGGTGATCT GCGGACGCTG CGGTGCACAT CTCGGCCATG TCTTCGATGA CGGCCCCCCT CCTACCGGAA AGAGGTTTTG TATGAACTCG ATCGTGCTTG ATTTTGAGCC TGACGGAGAG TGA
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Protein sequence | MHSTVRCLKA PQAVLFLLLM LPALLAGCGG ATFPENEKDD SMISKQEKPG NPYYSRTDTT TLDLPDSVWA KVLTKEVYRV ARQKETEQAF SGKFLDFEGR GSYFCAACGN ALFRSDAKFA DTCGWPSFFE PVREKSIFYQ PDTSHGLVRT EVICGRCGAH LGHVFDDGPP PTGKRFCMNS IVLDFEPDGE
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