Gene Cphamn1_0088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0088 
SymboltrkA 
ID6373731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp82189 
End bp83577 
Gene Length1389 bp 
Protein Length462 aa 
Translation table11 
GC content50% 
IMG OID642682604 
Productpotassium transporter peripheral membrane component 
Protein accessionYP_001958552 
Protein GI189499082 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGTTA CAAATATACT GGTAATCGGT TTGGGAGGAG TAGGGCTCCA TGTTGCGCAG 
CGCCTTGTTC ATGATGGATA CGGTGTTACG GTAATCGAAT CGAGCCCCCA GCTGATCAAC
AGCGTTAACG ACAAGATCGA CGCGAAAATC ATTGAGGGAA ACGCCATGGA GCTTGCCTGC
TGGAAGCGGG CAAAAGCAGA AACCATGGAT CTCATGATAG CCGTTACCAA TGAGGACTCG
GTCAATATGA TAGCCTCCAT CATCGCTGAC CGGTTCGGCA TTCCGCGTAA AATTGCCCGT
GTCCGTTCCC CCGAATACGG TTATGAAAAC TCGTTTCTCA ACAAAAGCGA TTTCAAAATC
GATCTGGTCA TACACCCCGA AGAACTGGTT GCGCAGGAAA TGGCACGCCT TGTCATGCGG
GCCTCGGCAA ACGACGTCGT CGACATCGGT GAAGGCGAGA TGAAGGTTGT CGCCATGCGC
GTCAGCCAGG ACAGTCCGGT GGTCAACAAG ACACTGAAAG AGATTGCCCT TCTGCACAAT
GATTTTCAGT TCAAGATCGT TGCCGTTGCA CGAGGCATCG CCACCATTAT TCCGGGCGAC
GATGACACAA TTCTTACAAA CGACCAGATC TTCATCATGC TGAACGGCAA GAACCTGTCG
CGGCTGATGA ATCTCATGAA CGTTCGCGAA CAGAGCATTC ACAAGGTCAT GATCGTCGGC
GGCGGTATGG TTGGTGCCCG GGTGGCCAAG CTGCTCGGCA AAACCGTAAA AATAACACTC
ATAGAAAATG ACAAGGAGCA TGCAGAAGAG CTTGCCTCTT CGCTGAACAA CACCGATGTT
CTGCTTGGTG ACGGAACCGA CGTCAATGTC ATGGTGCTTG GCGGGCTGAT GGAAATGGAC
AGCTTCATTG CAACAACAGG CAACAATGAA ACAAACATCA TCAGCTGCCT GCTGGCCAAA
CACATCATGA ACAGAACCAA TGTAGACGCC AATGCCACAG TTGGAAAAAC CATCGCGCTG
GTAAAAAAAG AGGACTATCT GGTTCTGGCG TCAACTATCG GTCTCGACGT TGCTCTGAAC
AAAAAGATCT CTGCCGCCGA TGAAATCATG AAGTTTATCA GAATGGGGGA ATTGTTCTCA
CTTGCCCATC TTCACGGTGT CGACGCAGAA GTCATTGAGC TTGCCGCATC ACCAAGGTCC
CAGATCACAA AAAAGCCCCT GAAAAAAATG CGAACCATGC TGCAGGACAA ACAGATTCTC
ATTGCCGGTG TCGTGCGTGA CGGGCTATGC GAACTGACGG ATGAACACAC GGTTATCGAA
CCGAACGACC TTGCTGTCGT GGTTTCAGCG ACCAAGAGCC TCAAGGACGC ACGCGAGCTT
TTCAATTAA
 
Protein sequence
MSVTNILVIG LGGVGLHVAQ RLVHDGYGVT VIESSPQLIN SVNDKIDAKI IEGNAMELAC 
WKRAKAETMD LMIAVTNEDS VNMIASIIAD RFGIPRKIAR VRSPEYGYEN SFLNKSDFKI
DLVIHPEELV AQEMARLVMR ASANDVVDIG EGEMKVVAMR VSQDSPVVNK TLKEIALLHN
DFQFKIVAVA RGIATIIPGD DDTILTNDQI FIMLNGKNLS RLMNLMNVRE QSIHKVMIVG
GGMVGARVAK LLGKTVKITL IENDKEHAEE LASSLNNTDV LLGDGTDVNV MVLGGLMEMD
SFIATTGNNE TNIISCLLAK HIMNRTNVDA NATVGKTIAL VKKEDYLVLA STIGLDVALN
KKISAADEIM KFIRMGELFS LAHLHGVDAE VIELAASPRS QITKKPLKKM RTMLQDKQIL
IAGVVRDGLC ELTDEHTVIE PNDLAVVVSA TKSLKDAREL FN