Gene Cphamn1_0086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0086 
Symbol 
ID6373729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp78632 
End bp80533 
Gene Length1902 bp 
Protein Length633 aa 
Translation table11 
GC content51% 
IMG OID642682602 
Productpotassium efflux system protein 
Protein accessionYP_001958550 
Protein GI189499080 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0475] Kef-type K+ transport systems, membrane components 
TIGRFAM ID[TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGAAG GAGGCTTTTT TTTCCAGGCA TTTGTCTATC TCACCGCGGC AGTCGTTTCG 
GTTCCTGTAG CCAAAAAGCT CGGGCTTGGA TCTGTGCTGG GCTATCTGAT CGCCGGGATT
ATCATCGGTC CGTTTGTTCT TGGTCTGATC GGGGAGGAAG GGCAGAATGT GATGCAGTTC
GCGGAGTTCG GGATTATCAT GATGCTTTTT CTGATCGGAC TCGAGTTGAA GCCCTCTATG
ATCTGGAAGC TGAAAGGTTC TATTTTCGGC ATGGGCGGCG CGCAGGTTTT TACTACCGCA
CTGATCGTGA TGGCAATAGC GATTATGTTC GGGTTGCAGT GGAAGACTTC TCTGGCTCTC
GGCCTTGTTC TGGCGTTATC ATCGACCGCT ATTGTGCTTC AGACGCTGCA TGAAAAAGGG
TTGATGAAGA CTGACGGCGG GCAGAATTCC TTTTCGGTAC TGCTTTTTCA GGATATCGCG
ATTATTCCCA TTCTGGCGAT GCTTCCCCTG CTCGCAACAG GTCATGCTGC TGTACATGAA
GCGCATGGCG AAGGAGCTAC TCAGGCGTTC CAGGCCTGGA TGGACGGGCT GCCGATCTGG
GGACAGACTA TTGCCGTACT CGGGGTGGTT GCGGGGATTA TTCTTGCGGG GAGATATCTT
GTCAATCCGG CGTTTCGTCT TATTGCACTA ACCAGGCTCA GGGAGATGTT TACGGCAGCA
GCCCTGCTTC TTGTCATAGG CATCACCGTA CTCATGGGCA TGGTTGGTCT CAGTCCGGCC
CTTGGCGCGT TCATCGCGGG CGTTGTTCTC GCTCAGAGCG AATACCGCCA TGAACTGGAA
ACAAATATTG AACCATTCAA GGGCCTGCTT CTGGGGCTTT TCTTTATTTC CGTGGGGGCA
TCGATTGATT TTCTTGTCAT AGCATCCAAT CCTCTGGTTA TACTCGAACT GGTTGCTGCG
CTCATAATTC TGAAGTTCCT CATACTTGCT GCCATCGGCA GGGTGTTCAG AATGAGTTTT
GACAACATAC TTCTTTTTGC TCTTGCGCTC GCTGAGGGGG GAGAGTTTGC TTTTGTCCTT
TTCTCATTCG GTCTCAACAA TGGTGTTTTT GAGGCATCGC TGGTCAATCC GCTTATCGCG
GTTGTGGCAT TGAGTATGGC TATGACGCCT ATGCTCGTTC TGCTGAACGA AAAGCTCATT
CAACCGAGGT TCGGGACAAA AGAGATGCCT GAAAAAGTGC CTGACAGGAT TGATAAAAGG
AGCCGTGTCA TTGTTGCAGG ATTTGGCAGG GTAGGCAGTG TTGTCGGCAG GTTTATGCAG
GCCAATGACG AGGAGGCGAC CTATCTTGAC GCGGATCCTG ATAATGTTGA GCTGCTTCGA
AAAATGGGTT TGCAGGTGTT TTATGGAGAC GCTTCACGCA GCGGTCTTCT GGAGGCTGCA
GGGGCTGCCG AGGCGGAATT GCTTGTTATT GCCGAGGATA ACACAGAAAA GGTGGTGGAA
ATCGCCCGAA CAGCACGGAA ATATTTTCCT CATCTTGAGA TAATAGCCCG CGCAAGCGGG
TGGGACGATT CCTACGAACT GATCGACATG GGCGTCAGTA AAATATATCT CGACACTCTT
GATTCCGCTT TACGTATCGG TGGTGATGCA TTGAGCCGAC TGGGACATCG CAAGTATCAC
GTCAGAAGAG CAATGAATAC GTTTCGACGG CATGAAGAGA ACCACGTGTA TGAGCTTGCG
GAAATGCGGC ATGATAAAAA GGAACTTATC CGTGCGACCA AACAGAGGAT CGAGGATCTC
GAACAGCTGA TGATGGATGA ACGGGAAGAG CTGCACAAGG ATAAAAACCT CGGTTGGGAT
ACGTCGGGCC ATACGAACGA CGAACATCTT ATGCGCAGTT GA
 
Protein sequence
MHEGGFFFQA FVYLTAAVVS VPVAKKLGLG SVLGYLIAGI IIGPFVLGLI GEEGQNVMQF 
AEFGIIMMLF LIGLELKPSM IWKLKGSIFG MGGAQVFTTA LIVMAIAIMF GLQWKTSLAL
GLVLALSSTA IVLQTLHEKG LMKTDGGQNS FSVLLFQDIA IIPILAMLPL LATGHAAVHE
AHGEGATQAF QAWMDGLPIW GQTIAVLGVV AGIILAGRYL VNPAFRLIAL TRLREMFTAA
ALLLVIGITV LMGMVGLSPA LGAFIAGVVL AQSEYRHELE TNIEPFKGLL LGLFFISVGA
SIDFLVIASN PLVILELVAA LIILKFLILA AIGRVFRMSF DNILLFALAL AEGGEFAFVL
FSFGLNNGVF EASLVNPLIA VVALSMAMTP MLVLLNEKLI QPRFGTKEMP EKVPDRIDKR
SRVIVAGFGR VGSVVGRFMQ ANDEEATYLD ADPDNVELLR KMGLQVFYGD ASRSGLLEAA
GAAEAELLVI AEDNTEKVVE IARTARKYFP HLEIIARASG WDDSYELIDM GVSKIYLDTL
DSALRIGGDA LSRLGHRKYH VRRAMNTFRR HEENHVYELA EMRHDKKELI RATKQRIEDL
EQLMMDEREE LHKDKNLGWD TSGHTNDEHL MRS