Gene Cphamn1_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0060 
Symbol 
ID6373703 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp58520 
End bp59842 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content56% 
IMG OID642682580 
Productamidohydrolase 
Protein accessionYP_001958528 
Protein GI189499058 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGATTGT CGGTCAACTT ATTTGAAACA AACATGATCA GTTTTACGAA CACTCCTTCC 
GAAGCAGCCC GTTCGAACAT TGTCATTACA AACGTCCGTA TCTTCGACGG TGAGAGCGAA
GAGCTTCGCG AGGGCATGAA CGTTCTCGTT GAAAAGAATG TCATCAAAAA AATTCAGGCC
GCGTCACTCC CTTGCACTCA GAACGACACC GTCATTGACG GAAAAGGGCA TGTGCTGATG
CCGGGGATGA TCAACAGCCA TTTCCACATG ATCGGCGCCA TGAGCGCACA GATGCTCTTT
TCCAATCCGA CAAAAGATTA CCGGGCATTC TGGCTCGCCA GGGGACTTCA AGAAACGCTG
ATGCAGGGCA TCACGACCAT CCGCGACGCG GGCGGCAACG ACTGGGGAGT CGTCCGTGCG
GCCGAAGAGG GGATGTTCAA CGCACCCAGG ATCTTTGCTT CAGGTGCGCT TATTTCACAG
ACATCGGGAC ATTTCGATTT CCGCCATACA CACATTCCTC CCGACAGCGG TCAGTTGAGC
GGAGGCGTCA CGTCCCTGCT CGACGGAATT TCCTACATCG CCGACGGAGT TGACGCTGTC
CGCAAAGCCG CACGGGAATG CCTTCGCCAG GGCGCGAAGC AGATCAAGAT CGCCTCGGGC
GGCGGCATTA TTTCGAAGGC CGACCCGATC CACACCCTGC AGTACTCCGC CGAAGAAGTC
CGTGCGGCTG TAGAGGTCGC AGAAAGCTGG GGAACATACG TCGCGTCGCA CGCCTATACA
GCGGAGTCGG CCATCCGCGA TATCGAAAAC GGCGTCATGT CGATAGAGCA CGCAAGCATC
ATGAACGATC ACGCCGTGAG CCTCGGCGTG GAAAAGGAGG TCTGGTGGTC CCCGCAGACG
GTCGTGTTCC TCCATCCCCC GGAAGGATGG GGCGAAGCCG AACGGAAAAA ACTTGCCCCT
GTTGCCGAGG GTCTCGAGAA GACCTTTGAA CTCTTTCGCC AGTATAACGC CAAAGTCCTC
TTCGGCACCG ACTGTTTCGG CAACATGGAC GACCAGCACC TGGAGTTTGT CTACAGGTCG
CGCTTCTTTC CGCCGTTCGA GATTCTCCGC CACGCCACCT CGAACGGGGG AAAGGCACTG
CGGATGTGCG GCAAGCTCTA CCCGTATTCA GGCGACCTCG GCGTGATCAG GGAAGGGGCA
ATGGCAGACA TGCTCATCGT CAAGAACAAT CCTCTCGAAG ACGCGACGAT CCTGTCGAAT
TACGAAGAAC AGTTGCTACT GATCATGAAA GACGGCTGCC TCTACAAGAA CCTGCTGGGA
TAA
 
Protein sequence
MGLSVNLFET NMISFTNTPS EAARSNIVIT NVRIFDGESE ELREGMNVLV EKNVIKKIQA 
ASLPCTQNDT VIDGKGHVLM PGMINSHFHM IGAMSAQMLF SNPTKDYRAF WLARGLQETL
MQGITTIRDA GGNDWGVVRA AEEGMFNAPR IFASGALISQ TSGHFDFRHT HIPPDSGQLS
GGVTSLLDGI SYIADGVDAV RKAARECLRQ GAKQIKIASG GGIISKADPI HTLQYSAEEV
RAAVEVAESW GTYVASHAYT AESAIRDIEN GVMSIEHASI MNDHAVSLGV EKEVWWSPQT
VVFLHPPEGW GEAERKKLAP VAEGLEKTFE LFRQYNAKVL FGTDCFGNMD DQHLEFVYRS
RFFPPFEILR HATSNGGKAL RMCGKLYPYS GDLGVIREGA MADMLIVKNN PLEDATILSN
YEEQLLLIMK DGCLYKNLLG