Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0052 |
Symbol | |
ID | 6373695 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 53645 |
End bp | 55210 |
Gene Length | 1566 bp |
Protein Length | 521 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 642682573 |
Product | Integrase catalytic region |
Protein accession | YP_001958521 |
Protein GI | 189499051 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4584] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAACA AACCATTGGA TATGTTACAA CAAATTCGAA GATGTCTCGT TCTCTTACAG GAAGCCCGTT CAGTCCGGCA AATCCACCGG CTGACAGGCA TCCACCGCAA CACGGTCAAA AGCTACGTGG AGCGGTTCAA GCACAGCGGC AAAACCTATG CCGAGCTTCT TGCGCTGCCA GACCATGACC TGGCTGAGCT GATCTACCCG CCACGCCACA ACCATCAGGC TGACGACCGT TACCTCTATC TCTCAGGGCG ATTACAGCAC TATGCCGATG AACTGAAGCG CCCTCATGTC ACCAGGCAGC GTCTTTGGGA AGAATACCTG GAACAACAAC CCCATGGGTA TCGCTATGCG CAATTCTGCC TGCACCTTGA CCGCTATATC CAGCAGCATG AACCGACCAT GCCGCAAGTC CATCATCCCG GCGACAAGCT GCAAATCGAC TTTGCCGGCG ACCCGTTACG GTATTATGAC CCGGTCGCGC ATGAATGGAT TAACTGCCCG GTCCTGGTCT GCTCCCTGCC CTGCAGCGCG ATGTTCTACG CTGAGCCTTT GACGTCAAGC CGACAGGAGC ACCTGATCCC GGCTCTCAAT AGCGCATTGG CATACTTTGG CGGCGTTCCC CGCAACATCC TCAGCGATAA TATGGCGCAG GTCGTCACCA AGCCATCGCG TTACGAGCCG GTCTTTACGG AACTGGTCGA GCAGTGGGCC TTGCACTACC GGACCAATAT GCAGGCAACG CGGGTTGCCA AACCAAAGGA TAAGGCGTCG GTGGAAAACA GTGTTCATAT TGCCTACCAG CAGATCTATG CTGCCATGCG CAACGAATGC CATCACTCGC TCAAAGCCTT GAAGCACCGT GTCAGGGAGT TGCTGGAAAA AGCCAACGAA CGAACCATGA CGGCATATGG CAAGAGCCGC AAGGAACGCT TTCTGGAGCT GGAAAAGGAG CATCTGGCTC CCTTACCGCC AAAGCACTTT GTCTACAAAC ATCAGGCGAA AGCCAAGGTC AAGAAGAACT ACCATGTCAT TCTCGGTGAA GACTGGCATC AGTACAGTGT ACCGCACGCG TATATCGGTC AGCGGGTGAA GCTGATCTAT GATGACGATG TGGTCGAGAT CTTCTGTGAG TACAAGCGCA TCGCCGTCCA TCAGCGTGCG TTTGTCCGCA ACGGCTACAG TACCATCAAA GAACACATGC CGGAGTCTCA CCGCAACTAC CTCCTGCAGA AGGGATGGAC GCCGGATGAC TTCCTGGAAA AAGCCCATGA GATCGGTCCG GGCACCGAGG AAGTCGTCAC CCGTTTTCTT GCAGCCAAGG CTTTCCCGGA ACAGTCCTAT GATGCCTGTA TCGGGCTGCT GCGACTGGCC AAAGGATTTG GCAGGAAACG GCTTGAAAAC GCCTGCTCAC TGGCGTTGCA AGGATCACGT GTCACGTATC GTATCGTGAA AACAATCCTG GAAAACAACC GTGACAAGCT GGTGCTTCCG ACAGAAGAAC AAGCGCCGAT GCTGCCGTTC CATGAAAATA TCCGAGGGAA GCATTTCTAC AACTAA
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Protein sequence | MANKPLDMLQ QIRRCLVLLQ EARSVRQIHR LTGIHRNTVK SYVERFKHSG KTYAELLALP DHDLAELIYP PRHNHQADDR YLYLSGRLQH YADELKRPHV TRQRLWEEYL EQQPHGYRYA QFCLHLDRYI QQHEPTMPQV HHPGDKLQID FAGDPLRYYD PVAHEWINCP VLVCSLPCSA MFYAEPLTSS RQEHLIPALN SALAYFGGVP RNILSDNMAQ VVTKPSRYEP VFTELVEQWA LHYRTNMQAT RVAKPKDKAS VENSVHIAYQ QIYAAMRNEC HHSLKALKHR VRELLEKANE RTMTAYGKSR KERFLELEKE HLAPLPPKHF VYKHQAKAKV KKNYHVILGE DWHQYSVPHA YIGQRVKLIY DDDVVEIFCE YKRIAVHQRA FVRNGYSTIK EHMPESHRNY LLQKGWTPDD FLEKAHEIGP GTEEVVTRFL AAKAFPEQSY DACIGLLRLA KGFGRKRLEN ACSLALQGSR VTYRIVKTIL ENNRDKLVLP TEEQAPMLPF HENIRGKHFY N
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