Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0050 |
Symbol | |
ID | 6373693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 52230 |
End bp | 52928 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642682571 |
Product | cytochrome c class I |
Protein accession | YP_001958519 |
Protein GI | 189499049 |
COG category | [C] Energy production and conversion |
COG ID | [COG3245] Cytochrome c5 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTTC TGTCAGACAC TACTTATCTT TTTCAGGTGA GTGATTGGGT AATAGAAAAT AAAGGACCAA TTGTATTGCC TCCAGGAAAA GCTACGTTTA TTGATTCGTA TCCGGGTATA TTGAAATTTG TAAAGCTAAA TAATCAAAAT GTTTTTGAGG ATTTCACTGT GCATTTTCCT AGTGAAAGAA AATATAGGTA TAATGGTATG ACTAAAGATC AGGTTGAGAG AATTGGTGAA GAACAGCTGA TAATTAGAAC AATCGATCTT AAGCCTGGTA TGTATGCGTG GGTTGAGTAT TCTATAACGC TTGGAATGGG GTTAATGACA GGAAAAGAGC AAAATCTTAC TATGATAAAG GTTGACGAGG ATGAAGAATA CATAAAAAAT GGGAGTGAAA AAAGTACAGA TAATAAATAT GATTACCTGA GTTCGTACGA TATTGTGGAT GGTGAAAAGA TATACGAATT GAATTGTGCG GACTGTCATG CAGAAGGCGT ACTTAATTCT CCCAGAGTTG GTGATATAGG CGAATGGGAG AATCGCATAA AGCAGGGAAT ACTGGCAATG ATAGATAAAA CAATAAAAGG ATATAAATCT GACGGTTATA TGCCTGCAAA AGGCGGTGCT GTACATCTTA GCAATGAGAG GTTTGCTAAT GCAGTGGCAT ATATGGTTTA TCAGAGCACT GAAAAATAA
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Protein sequence | MAFLSDTTYL FQVSDWVIEN KGPIVLPPGK ATFIDSYPGI LKFVKLNNQN VFEDFTVHFP SERKYRYNGM TKDQVERIGE EQLIIRTIDL KPGMYAWVEY SITLGMGLMT GKEQNLTMIK VDEDEEYIKN GSEKSTDNKY DYLSSYDIVD GEKIYELNCA DCHAEGVLNS PRVGDIGEWE NRIKQGILAM IDKTIKGYKS DGYMPAKGGA VHLSNERFAN AVAYMVYQST EK
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