Gene Cphamn1_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0050 
Symbol 
ID6373693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp52230 
End bp52928 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content36% 
IMG OID642682571 
Productcytochrome c class I 
Protein accessionYP_001958519 
Protein GI189499049 
COG category[C] Energy production and conversion 
COG ID[COG3245] Cytochrome c5 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTTC TGTCAGACAC TACTTATCTT TTTCAGGTGA GTGATTGGGT AATAGAAAAT 
AAAGGACCAA TTGTATTGCC TCCAGGAAAA GCTACGTTTA TTGATTCGTA TCCGGGTATA
TTGAAATTTG TAAAGCTAAA TAATCAAAAT GTTTTTGAGG ATTTCACTGT GCATTTTCCT
AGTGAAAGAA AATATAGGTA TAATGGTATG ACTAAAGATC AGGTTGAGAG AATTGGTGAA
GAACAGCTGA TAATTAGAAC AATCGATCTT AAGCCTGGTA TGTATGCGTG GGTTGAGTAT
TCTATAACGC TTGGAATGGG GTTAATGACA GGAAAAGAGC AAAATCTTAC TATGATAAAG
GTTGACGAGG ATGAAGAATA CATAAAAAAT GGGAGTGAAA AAAGTACAGA TAATAAATAT
GATTACCTGA GTTCGTACGA TATTGTGGAT GGTGAAAAGA TATACGAATT GAATTGTGCG
GACTGTCATG CAGAAGGCGT ACTTAATTCT CCCAGAGTTG GTGATATAGG CGAATGGGAG
AATCGCATAA AGCAGGGAAT ACTGGCAATG ATAGATAAAA CAATAAAAGG ATATAAATCT
GACGGTTATA TGCCTGCAAA AGGCGGTGCT GTACATCTTA GCAATGAGAG GTTTGCTAAT
GCAGTGGCAT ATATGGTTTA TCAGAGCACT GAAAAATAA
 
Protein sequence
MAFLSDTTYL FQVSDWVIEN KGPIVLPPGK ATFIDSYPGI LKFVKLNNQN VFEDFTVHFP 
SERKYRYNGM TKDQVERIGE EQLIIRTIDL KPGMYAWVEY SITLGMGLMT GKEQNLTMIK
VDEDEEYIKN GSEKSTDNKY DYLSSYDIVD GEKIYELNCA DCHAEGVLNS PRVGDIGEWE
NRIKQGILAM IDKTIKGYKS DGYMPAKGGA VHLSNERFAN AVAYMVYQST EK