Gene Cphamn1_0023 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0023 
Symbol 
ID6373665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp27585 
End bp28724 
Gene Length1140 bp 
Protein Length379 aa 
Translation table11 
GC content51% 
IMG OID642682544 
Productgeranylgeranyl reductase 
Protein accessionYP_001958493 
Protein GI189499023 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID[TIGR02023] geranylgeranyl reductase
[TIGR02032] geranylgeranyl reductase family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.086385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.74185 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTTG ATGTCGCAGT AGTCGGCGGA GGCCCTTCAG GCGCTGTCGC CGCAGCCGAA 
CTGGCAAAGG CGGGAATTTC CACCGCCCTC ATTGAACGGA ACCTTGAGAA CGTAAAACCG
TGCGGAGGGG CTATTCCGCT CGGCCTTATT GAAGAGTTCG GGATCCCTGA AGCACTGGTA
GAGAAAAAGC TATCCCGAAT GAGCGTTCGA TCTCCAGCGG GAAGAATGAT CTTCATGGAA
ATGCCGAACG GCTATGTCGG TATGGTCAGG CGTGAGCGTT TTGACAGCTA CCTGCGCGAT
CGGGCAAAAC GGCACGGCTC GGAAGTCATC GAAGCTCGCA TGAAGGAGAT CAGTCGAAGT
GGTGACACCT ATACCATAAC CCTGTCCAAA GAGCATCCCC CGGTTGAAGC TTCCTATATC
ATCGGAGCGG ATGGAGCAAA CTCCAGAACC GCAGAGGTTC TCGGCTTTCC TCAAAACGAG
CTGCAGGTCA TCGCCATGCA GCAGCGTTTC CACTATTCCG ACACCCTGAA ACCCTACGAA
GATCTGGTTG AAATCTGGTT TGACGGCGAC GTATCGCCGG ATTTCTATGG CTGGATATTT
CCGAAAACAG ATCATATCGC CATAGGAACA GGCACCGAAT TTCGCAAACA CAACCTGAGA
GAACTTCAGG ATCGATTCGT TCAAAAGATA GGAATTTCTG AAAAGCCCTA CCTTGACGAG
GCTGCCAAGA TCCCGATGAA GCCCAGAAAA TCCTTTACTC AGGACAATGC TATTCTGGTT
GGTGATGCCG CGGGACTTGT CACCCCTGCA AATGGAGAAG GCATATTCTT TGCCATGCGC
TCCGGAAAAC TCGGCGCAGA GGCAATGATA GACCGGATAC GAAACAACAA GCCGCTGAAA
ATCTACGAGA AGACTTTCAG AAAACTCTAT GCACCCATCT TCTTCGGGCT GCAGACGCTC
CAGTCGGTCT ATTACAAAAA CGATCGACTC AGAGAAAGCT TTGTGGCCAT CTGTGAGGAC
AGGGATGTTC AGAGAATCAC CTTTGACTCC TATCTTTATA AGAAAATGGT ACCCGCTCCC
TGGAGCGTAC AGATGAAAAT ATTCATGAAA AACATCTACC ACCTGGCAAA GGGATCGTAA
 
Protein sequence
MRFDVAVVGG GPSGAVAAAE LAKAGISTAL IERNLENVKP CGGAIPLGLI EEFGIPEALV 
EKKLSRMSVR SPAGRMIFME MPNGYVGMVR RERFDSYLRD RAKRHGSEVI EARMKEISRS
GDTYTITLSK EHPPVEASYI IGADGANSRT AEVLGFPQNE LQVIAMQQRF HYSDTLKPYE
DLVEIWFDGD VSPDFYGWIF PKTDHIAIGT GTEFRKHNLR ELQDRFVQKI GISEKPYLDE
AAKIPMKPRK SFTQDNAILV GDAAGLVTPA NGEGIFFAMR SGKLGAEAMI DRIRNNKPLK
IYEKTFRKLY APIFFGLQTL QSVYYKNDRL RESFVAICED RDVQRITFDS YLYKKMVPAP
WSVQMKIFMK NIYHLAKGS