Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0023 |
Symbol | |
ID | 6373665 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 27585 |
End bp | 28724 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642682544 |
Product | geranylgeranyl reductase |
Protein accession | YP_001958493 |
Protein GI | 189499023 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02023] geranylgeranyl reductase [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.086385 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.74185 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTTTG ATGTCGCAGT AGTCGGCGGA GGCCCTTCAG GCGCTGTCGC CGCAGCCGAA CTGGCAAAGG CGGGAATTTC CACCGCCCTC ATTGAACGGA ACCTTGAGAA CGTAAAACCG TGCGGAGGGG CTATTCCGCT CGGCCTTATT GAAGAGTTCG GGATCCCTGA AGCACTGGTA GAGAAAAAGC TATCCCGAAT GAGCGTTCGA TCTCCAGCGG GAAGAATGAT CTTCATGGAA ATGCCGAACG GCTATGTCGG TATGGTCAGG CGTGAGCGTT TTGACAGCTA CCTGCGCGAT CGGGCAAAAC GGCACGGCTC GGAAGTCATC GAAGCTCGCA TGAAGGAGAT CAGTCGAAGT GGTGACACCT ATACCATAAC CCTGTCCAAA GAGCATCCCC CGGTTGAAGC TTCCTATATC ATCGGAGCGG ATGGAGCAAA CTCCAGAACC GCAGAGGTTC TCGGCTTTCC TCAAAACGAG CTGCAGGTCA TCGCCATGCA GCAGCGTTTC CACTATTCCG ACACCCTGAA ACCCTACGAA GATCTGGTTG AAATCTGGTT TGACGGCGAC GTATCGCCGG ATTTCTATGG CTGGATATTT CCGAAAACAG ATCATATCGC CATAGGAACA GGCACCGAAT TTCGCAAACA CAACCTGAGA GAACTTCAGG ATCGATTCGT TCAAAAGATA GGAATTTCTG AAAAGCCCTA CCTTGACGAG GCTGCCAAGA TCCCGATGAA GCCCAGAAAA TCCTTTACTC AGGACAATGC TATTCTGGTT GGTGATGCCG CGGGACTTGT CACCCCTGCA AATGGAGAAG GCATATTCTT TGCCATGCGC TCCGGAAAAC TCGGCGCAGA GGCAATGATA GACCGGATAC GAAACAACAA GCCGCTGAAA ATCTACGAGA AGACTTTCAG AAAACTCTAT GCACCCATCT TCTTCGGGCT GCAGACGCTC CAGTCGGTCT ATTACAAAAA CGATCGACTC AGAGAAAGCT TTGTGGCCAT CTGTGAGGAC AGGGATGTTC AGAGAATCAC CTTTGACTCC TATCTTTATA AGAAAATGGT ACCCGCTCCC TGGAGCGTAC AGATGAAAAT ATTCATGAAA AACATCTACC ACCTGGCAAA GGGATCGTAA
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Protein sequence | MRFDVAVVGG GPSGAVAAAE LAKAGISTAL IERNLENVKP CGGAIPLGLI EEFGIPEALV EKKLSRMSVR SPAGRMIFME MPNGYVGMVR RERFDSYLRD RAKRHGSEVI EARMKEISRS GDTYTITLSK EHPPVEASYI IGADGANSRT AEVLGFPQNE LQVIAMQQRF HYSDTLKPYE DLVEIWFDGD VSPDFYGWIF PKTDHIAIGT GTEFRKHNLR ELQDRFVQKI GISEKPYLDE AAKIPMKPRK SFTQDNAILV GDAAGLVTPA NGEGIFFAMR SGKLGAEAMI DRIRNNKPLK IYEKTFRKLY APIFFGLQTL QSVYYKNDRL RESFVAICED RDVQRITFDS YLYKKMVPAP WSVQMKIFMK NIYHLAKGS
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