| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0021 |
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| Symbol | |
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| ID | 6373663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 25214 |
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| End bp | 26905 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642682542 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_001958491 |
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| Protein GI | 189499021 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000380746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.822612 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTT ATTCGACAAG CGGTATCGGC AGCATGGTGA TGCGGGTTTT TGTTTCTCTT
CTCTTCTTTT CGGGAACGTT TCTGAAAACG GCGGAAAGCC GTGAGAGCGA CTCTTTTTAC
ATCGCAAAAA ACATTGAGCT GCTCGGTGAG GTTTACCGGA ACGTTTCTGA AAATTATGTT
GATAGTATAG ACACGGCGGA GTTCATGTAT GCCGGTATAG ATGGTATGCT TGAAACGCTT
GATCCCTATA CGGTTTTTCT TGACGAAAAA GAGTCGGATG AACTCGGAGA GCTGACAAGC
GGGCACTATG CCGGCATCGG AGTCAGGATA TCGGAAATTG CCGGGGAGGT CTATGTTCTT
TCGGTTTTTG ACGGGTCTCC GGCGGCAAAA GCCGGACTTC GTGTCGGCGA TCGTATCGAG
AAGGTTGACC GGCATATCGT TAAGGGAAAA GATCTTGATG AGGTGAAGAC TTTCATCAAA
GGGCCAGCCG GAAGCGAGGT CGTTCTCACT GTTGAAAGGT ACGGGAAGAA GAGCAGGGTT
CGGGCAAGGA TTACCCGTCG CGAAGTCAGG GTTAACAGCA TACGCTATTC GGGACTGCTT
GGAGAGATCG GATATCTCGT GATGGACTCA TTCGGGAACA GGAGTCCGGA TGAGCTCAAG
AGGGCGATCA ATGAACTGGA TGCCGCATCG AGAATCAGGA AACGCCCCAT GGCCGGCGTG
ATTCTGGATC TACGGAACAA TCCGGGCGGG TTGCTTGAGG CCGCCGTTGA TGTCAGCGGG
CTTTTTGTCA GCAAGGGCAG TCAGGTCGTT TCAACCATGG GTCGTGATCC TGAAAGCAGA
ATCAGCTACG AGACAAAGCG TGCTCCTGTC GTCGAAAAGC GACCTCTGGC CATACTGATC
AATAAAAACA GCGCGTCAGC CGCCGAGATT GTTGCAGGGG CAATCCAGGA GCTTGATCGT
GGCGTGATTG TCGGAAACCG TTCGTTCGGC AAAGGGCTTG TTCAGTCAGT AATCACCCTT
CCCTATGACT CCAAGCTGAA GATGACAACG TCCAAGTACT ATACACCTTC CGGTCGTCTG
ATCCAGCAGG AGCATGACTG GACAGGGGGG CCCCGCAAGG TTCTTGAGCG CGAAGAAAAG
CCGGCAGATG GTATGGTGTT TTATACCCGT AACAAGCGTA AGGTTTATGG AGGAGGAGGT
ATTCTTCCCG ACATCAGGCT TGACGGATAT ATTCCCGGCA GCTATGAAGC CGCTCTGCGC
AAGGACGGAA TGCTTTTCCG CTTCGCCAGT ACATACAGGG CATCACATGA TCGAATCCCG
CAGGCCGGCA TTGACAGAAA ATCGTTGATG CGCGATTTTG CCGGTTTTCT CGAAAGGGAG
TCGTTCATCT ACAAATCCAA ACCGGAGGAG CTTCTTGAGG AAGTCAGGAA ATCCCTTGCC
GGGAATCATA AAGAGGCTCA TCCTGGGATC GATTCGCTCG TCGCATCTCT TGAAAAGGAG
ATGAAACTTC TTGCCGGTAA GCAGAAATCA AGCGAATCGA AACAGGTCGC TCTTGCTCTT
GAGCAGGAAA TCCTGCGTCA TTACGATGAG GAGGCTGCTC TACGAAGCCG AATAGAGGAC
GATCCTGTCG TTAAAAAAGC GTTGGAAGTT CTGCAGGACC CGGGCAGGTA CAGCACGTTG
CTCAGCCCAT AG
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| Protein sequence | MKRYSTSGIG SMVMRVFVSL LFFSGTFLKT AESRESDSFY IAKNIELLGE VYRNVSENYV
DSIDTAEFMY AGIDGMLETL DPYTVFLDEK ESDELGELTS GHYAGIGVRI SEIAGEVYVL
SVFDGSPAAK AGLRVGDRIE KVDRHIVKGK DLDEVKTFIK GPAGSEVVLT VERYGKKSRV
RARITRREVR VNSIRYSGLL GEIGYLVMDS FGNRSPDELK RAINELDAAS RIRKRPMAGV
ILDLRNNPGG LLEAAVDVSG LFVSKGSQVV STMGRDPESR ISYETKRAPV VEKRPLAILI
NKNSASAAEI VAGAIQELDR GVIVGNRSFG KGLVQSVITL PYDSKLKMTT SKYYTPSGRL
IQQEHDWTGG PRKVLEREEK PADGMVFYTR NKRKVYGGGG ILPDIRLDGY IPGSYEAALR
KDGMLFRFAS TYRASHDRIP QAGIDRKSLM RDFAGFLERE SFIYKSKPEE LLEEVRKSLA
GNHKEAHPGI DSLVASLEKE MKLLAGKQKS SESKQVALAL EQEILRHYDE EAALRSRIED
DPVVKKALEV LQDPGRYSTL LSP
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