| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0019 |
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| Symbol | |
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| ID | 6373661 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 22353 |
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| End bp | 24065 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642682540 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_001958489 |
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| Protein GI | 189499019 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000156089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAGA CTGTGAAAAA GCAGTTGCTG ATGAACAAGT CCGGCGACGA GATTCAGGTG
GCTCTGGTAG AAGAGGGTCG TCTGGCGGAG CTCGTGATCG AACGTCCGGA CAGTCTCCGC
AGCATAGGTG ATATATATCT CGGAAGGGTG CACAAGGTGG TTGAAGGGCT CAAGGCGGCG
TTTGTCGATA TAGGACAGAA GTCGGACGGA TTTTTGCATT TTTCCGATGT CGGAACCACA
ACCGAGGATT ATCGAGCGCT TATTGAAGAT GATGATGATG ACGACGAGAA CGGCAATGGC
GATACCGATG AAGAAGGGAA AGCGGGGATG AAAACGCAGC AGGAGCAGAA GGAGGATACC
CGGAGGCCTT CGCCTGCTGG AAACGGTCAG AAAAACGGAG GAAGCAGAAG CAAGGGCAAC
GGCGCAAGCG CCGGAAAAGA CGGGGACGGT AGACAGTCAT ACACCCAGAT GATTGCCGGG
AAGTTAAAGA CCAATGACTC TATTCTCGTT CAGGTGATCA AAGAACCTAT CAGCAACAAG
GGCTCTCGGT TGACTTCCGA TATCACCATA GCAGGACGTT TTATGGTGTT GCTTCCCTTC
GGAGGCGGCC AGATTGCGGT TTCCCGTCGA GTTGTCTCAC GCAAGGAGCG CGCAAGGCTT
AAAAAACTTG TTCGATCGAT GCTGCCGGAT GGTTTTGGCG CGATCATCAG GACTGTTGCG
GAACTTCAGG AGGAGGAACT GCTGAAAAAG GATCTTGAGA AGCTGCTTGT CAAGTGGGAG
CAGATTGAGG AAAAACTGAA GGACGCCAAA CCTCCACAGC TCATTTTCAA GGAGGATACC
ATTATTTCAA GTGTGCTGCG CGATTCCCTG ACGACTGATG TTACGGAACT GGTGGCTAAC
TCGCAGAGTA TTCACAAGGA GACCCTGAAC TATATTCAGT GGGCGGCTCC CGAGATGGAA
AAGAACGTGT TTTTCTATCA GGGCAAGCTT CCGCTTTTTG AAGGTTACGG AATCGCAAAG
GATGTTGAAT CCATCTTTTC CAGAAAGGTG TGGCTCAAGT CCGGCGGATA TATCATTATA
GAGCATACCG AGGCCATGGT TGTGGTCGAT GTGAACAGCG GGCGCTATGC GGCAAAGAAG
GAGCAGGAGG AGAACTCTCT GAAAACCAAC CTTGAAGCTT CGCGTGAGGT AGTACGTCAG
CTCAGGCTGA GGGATATCGG AGGGATAATC GTGGTTGACT TTATCGATAT GCTCGATCCG
AAAAATTCAA AGAAGGTCTA TGACTCAATG AAGAACGAAT TGCGTCAGGA CAGGGCGAAG
TCAAACATTC TGCCGATGTC GGATTTCGGG TTGATGCAGA TCACCAGGGA AAGGATTCGC
CCCAGCCTCA TGCAGCGCAT GGGTGATCAG TGTCCGGCTT GCGGCGGGTC AGGGATCGTG
CAGGCGCGTT GTACGACCAT CAACCAGATT GAGCGTTGGC TCAGGAAATA TGCTCTCCAG
AAGAAAATGG TGTTTCAGCA GCTTGACCTG TATGTTAGCC CGACTGTCGC AGAGCCTTTG
CGGGATACAG ACAGGAATAT TGAGATGAAA TGGTTTCTCC AGCATCTGCT TTTTGTCAGG
GTGAAACAGG ACGAGAGCCT GAGGAGCGAT GACTTCAGGT TCTATGCCCG GAAAAACAGC
GCGGATCTGA CTGCAGAGTA CGGTGATCTC TGA
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| Protein sequence | MKKTVKKQLL MNKSGDEIQV ALVEEGRLAE LVIERPDSLR SIGDIYLGRV HKVVEGLKAA
FVDIGQKSDG FLHFSDVGTT TEDYRALIED DDDDDENGNG DTDEEGKAGM KTQQEQKEDT
RRPSPAGNGQ KNGGSRSKGN GASAGKDGDG RQSYTQMIAG KLKTNDSILV QVIKEPISNK
GSRLTSDITI AGRFMVLLPF GGGQIAVSRR VVSRKERARL KKLVRSMLPD GFGAIIRTVA
ELQEEELLKK DLEKLLVKWE QIEEKLKDAK PPQLIFKEDT IISSVLRDSL TTDVTELVAN
SQSIHKETLN YIQWAAPEME KNVFFYQGKL PLFEGYGIAK DVESIFSRKV WLKSGGYIII
EHTEAMVVVD VNSGRYAAKK EQEENSLKTN LEASREVVRQ LRLRDIGGII VVDFIDMLDP
KNSKKVYDSM KNELRQDRAK SNILPMSDFG LMQITRERIR PSLMQRMGDQ CPACGGSGIV
QARCTTINQI ERWLRKYALQ KKMVFQQLDL YVSPTVAEPL RDTDRNIEMK WFLQHLLFVR
VKQDESLRSD DFRFYARKNS ADLTAEYGDL
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