| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0017 |
|---|
| Symbol | |
|---|
| ID | 6373659 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 21181 |
|---|
| End bp | 21561 |
|---|
| Gene Length | 381 bp |
|---|
| Protein Length | 126 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 642682538 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001958487 |
|---|
| Protein GI | 189499017 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0792] Predicted endonuclease distantly related to archaeal Holliday junction resolvase |
|---|
| TIGRFAM ID | [TIGR00252] conserved hypothetical protein TIGR00252 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00052241 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTTA TTCCCCACGA CCTCGGACGC CAGGGAGAAC ATACAGCCGT CACCTTCCTC
ATAGAAAAAG GGTACCGGAT TCTCCAGAGA AACTACCGTC ACCGACGCAA CGAGATAGAC
ATCATCGCCC TGGACAGGCG CACCCTCTGC TTCATTGAAG TCAAAACAAG ATCCTCGGCA
TCAAAAGGCC ATCCGCTTGA AGCCGTTACC CCTGAAAAAC AAAAAGAAAT AATCAGGGCG
GCAACCGCAT ATCTTAGCGC ATACCCTTCC CCTGAACCCG ACTGCAGATT TGATGTTATC
GCAATTATCG CGCACGACTT CACGAATGGC AGAATAAGAG AGTTCAAACT GGAACATATC
ACCAACGCCT TTATGACGTA A
|
|---|
| Protein sequence | MSFIPHDLGR QGEHTAVTFL IEKGYRILQR NYRHRRNEID IIALDRRTLC FIEVKTRSSA
SKGHPLEAVT PEKQKEIIRA ATAYLSAYPS PEPDCRFDVI AIIAHDFTNG RIREFKLEHI
TNAFMT
|
|---|
| |