Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0015 |
Symbol | |
ID | 6373657 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 19036 |
End bp | 20970 |
Gene Length | 1935 bp |
Protein Length | 644 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 642682536 |
Product | DNA gyrase, B subunit |
Protein accession | YP_001958485 |
Protein GI | 189499015 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
TIGRFAM ID | [TIGR01059] DNA gyrase, B subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000401037 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.862842 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAGA TCCAGAAAAA CACCTCTCCT CAAGCCTATG AGGCCACAAA TATTCAGATA CTTGACGGCA TAGAGCACGT TCGAAAAAGG CCCGCAATGT ATATCGGCGA CCTTCATTCA AGAGGGCTGC ACCATCTTAT TTATGAAATC GTCGACAACT CTATTGATGA AACTCTGGCA GGATACAACG AATCTATCGA GCTTTCATTG AATCCTGACG GCTCTGTAAC CGTGACGGAT AACGGCAGGG GAATACCGGT CGACATACAT CCGCAGAAGA AAAAATCAGC TCTTGAACTG GTTATGACGC TCATCGGCGC GGGAGGTAAA TTCGATAAGG GGGCGTATAA GGTTTCAGGG GGACTGCACG GTGTCGGCGC CTCTGTAGTA AACGCTCTTT CCGAATGGTG TGAGGTTGAA GTCTACCGGG AAGGGAATAT CTGGTTTCAG CGATATCACA AAGGAATCCC CCAACGCGAT GTAGAGGTTA TCGGCGAATC AACAAAAACC GGTACGAAAA CCACCTTCAT GCCGGATCCG GATATATTCA AAATCACGGA GTTTCGTAAG GATATTGTTG TTGACCGCAT GCGCGAACTT GCCTTTCTCA ACAATATCCT GAAAATAGTC GTCAAAGACA TTGACGGTTC CGAAGAGACG TTTCACTATG AAGGCGGCAT AAAAGAATTT GTCACCTTTA CCGACCATAA CAGAATCAGT CTTCTCAAGG AACCTGTGTA TATCAGCGGT GAGCGGGATT CGACAGTTGT CGAAATCGCC CTGCAGTATA ACGACTCGTA TCAGGAAAAT GTTTTCAGCT ACGTCAACAA CATCAACACC CATGAGGGGG GAACGCATGT TACCGGATTT CGCAAGGCCC TGACAAGAAC CCTCAATTCA TATGCCCAGA AGAACGATCT CCTGAAAAAC CTGAAACTTT CTCTCACAGG CGATGACTTC AAAGAGGGCC TGACAGCGAT CATATCGGTT AAAGTCGCCG AGCCGCAGTT CGAAGGACAG ACAAAAACCA AACTGGGCAA CTCGGAAACG CAGAGCATTG TCGAAAGCAT TGTCAATGAA CAACTTTCTG ATTTCGCTGA AAGCAACCCC GGTGTACTGA AAACAATCAT TGAAAAAGTC AAAAGTGCCG CGCTGTCAAG GGATGCCGCA AGAAAAGCAA AAGACCTCAC CAGAAGAAAA TCGGCACTCG AAAGCTCAGG ACTGCCCGGC AAACTCGCAG ACTGCTCGAT CAACGACCCC GAGCATTGTG AACTCTATAT TGTTGAGGGT GACTCCGCCG GCGGGAGTGC AAAGCAGGGA AGAGACCGCA GCTTCCAGGC TATCCTGCCG CTCAAGGGCA AAATTCTGAA CGTCGAAAAA GCCCGTCTGC ACAAAATGCT TGAGAATGAA GAGATAAAAA CAATCATACT CGCGCTCGGC ACAAGCTTCG GGGAAGAAGA ATTTTCAGTG GAAAAACTAC GGTACGGCAA AATAATCATC ATGACTGATG CTGACGTGGA CGGAGCCCAC ATCAGAACAC TGCTCCTGAC CTTCTTCTTC CGATACATGC GGTCCCTGAT AGAGGCAGGC AAGGTCTTCA TCGCCCAGCC TCCACTCTAC CTCATCAAGT CAGGTAAGGA GCAAAAATAC GCATGGGATG ACGATGAACG CAACGGCATT GTCGAGTCCA TCAGGAAAAA GCAGAAAGGG AGAGGGAATA TTAACATTCA GCGCTACAAA GGTCTGGGTG AAATGAACCC TGAACAACTC TGGAGCACAA CCATGGATCC GGAGCACCGT TCGCTGTTAC AGGTGTCCGT TGAAAATGCC ATGGAAGCCG ATCAGGTCTT TTCGACACTT ATGGGGGACA AGGTCGAACC ACGCCGAAAC TTTATTGAAA AAAACGCCCG CTATGTCAGA CGTTTAGATG TCTGA
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Protein sequence | MSEIQKNTSP QAYEATNIQI LDGIEHVRKR PAMYIGDLHS RGLHHLIYEI VDNSIDETLA GYNESIELSL NPDGSVTVTD NGRGIPVDIH PQKKKSALEL VMTLIGAGGK FDKGAYKVSG GLHGVGASVV NALSEWCEVE VYREGNIWFQ RYHKGIPQRD VEVIGESTKT GTKTTFMPDP DIFKITEFRK DIVVDRMREL AFLNNILKIV VKDIDGSEET FHYEGGIKEF VTFTDHNRIS LLKEPVYISG ERDSTVVEIA LQYNDSYQEN VFSYVNNINT HEGGTHVTGF RKALTRTLNS YAQKNDLLKN LKLSLTGDDF KEGLTAIISV KVAEPQFEGQ TKTKLGNSET QSIVESIVNE QLSDFAESNP GVLKTIIEKV KSAALSRDAA RKAKDLTRRK SALESSGLPG KLADCSINDP EHCELYIVEG DSAGGSAKQG RDRSFQAILP LKGKILNVEK ARLHKMLENE EIKTIILALG TSFGEEEFSV EKLRYGKIII MTDADVDGAH IRTLLLTFFF RYMRSLIEAG KVFIAQPPLY LIKSGKEQKY AWDDDERNGI VESIRKKQKG RGNINIQRYK GLGEMNPEQL WSTTMDPEHR SLLQVSVENA MEADQVFSTL MGDKVEPRRN FIEKNARYVR RLDV
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