Gene Cphamn1_0015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0015 
Symbol 
ID6373657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp19036 
End bp20970 
Gene Length1935 bp 
Protein Length644 aa 
Translation table11 
GC content48% 
IMG OID642682536 
ProductDNA gyrase, B subunit 
Protein accessionYP_001958485 
Protein GI189499015 
COG category[L] Replication, recombination and repair 
COG ID[COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit 
TIGRFAM ID[TIGR01059] DNA gyrase, B subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000401037 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.862842 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGAGA TCCAGAAAAA CACCTCTCCT CAAGCCTATG AGGCCACAAA TATTCAGATA 
CTTGACGGCA TAGAGCACGT TCGAAAAAGG CCCGCAATGT ATATCGGCGA CCTTCATTCA
AGAGGGCTGC ACCATCTTAT TTATGAAATC GTCGACAACT CTATTGATGA AACTCTGGCA
GGATACAACG AATCTATCGA GCTTTCATTG AATCCTGACG GCTCTGTAAC CGTGACGGAT
AACGGCAGGG GAATACCGGT CGACATACAT CCGCAGAAGA AAAAATCAGC TCTTGAACTG
GTTATGACGC TCATCGGCGC GGGAGGTAAA TTCGATAAGG GGGCGTATAA GGTTTCAGGG
GGACTGCACG GTGTCGGCGC CTCTGTAGTA AACGCTCTTT CCGAATGGTG TGAGGTTGAA
GTCTACCGGG AAGGGAATAT CTGGTTTCAG CGATATCACA AAGGAATCCC CCAACGCGAT
GTAGAGGTTA TCGGCGAATC AACAAAAACC GGTACGAAAA CCACCTTCAT GCCGGATCCG
GATATATTCA AAATCACGGA GTTTCGTAAG GATATTGTTG TTGACCGCAT GCGCGAACTT
GCCTTTCTCA ACAATATCCT GAAAATAGTC GTCAAAGACA TTGACGGTTC CGAAGAGACG
TTTCACTATG AAGGCGGCAT AAAAGAATTT GTCACCTTTA CCGACCATAA CAGAATCAGT
CTTCTCAAGG AACCTGTGTA TATCAGCGGT GAGCGGGATT CGACAGTTGT CGAAATCGCC
CTGCAGTATA ACGACTCGTA TCAGGAAAAT GTTTTCAGCT ACGTCAACAA CATCAACACC
CATGAGGGGG GAACGCATGT TACCGGATTT CGCAAGGCCC TGACAAGAAC CCTCAATTCA
TATGCCCAGA AGAACGATCT CCTGAAAAAC CTGAAACTTT CTCTCACAGG CGATGACTTC
AAAGAGGGCC TGACAGCGAT CATATCGGTT AAAGTCGCCG AGCCGCAGTT CGAAGGACAG
ACAAAAACCA AACTGGGCAA CTCGGAAACG CAGAGCATTG TCGAAAGCAT TGTCAATGAA
CAACTTTCTG ATTTCGCTGA AAGCAACCCC GGTGTACTGA AAACAATCAT TGAAAAAGTC
AAAAGTGCCG CGCTGTCAAG GGATGCCGCA AGAAAAGCAA AAGACCTCAC CAGAAGAAAA
TCGGCACTCG AAAGCTCAGG ACTGCCCGGC AAACTCGCAG ACTGCTCGAT CAACGACCCC
GAGCATTGTG AACTCTATAT TGTTGAGGGT GACTCCGCCG GCGGGAGTGC AAAGCAGGGA
AGAGACCGCA GCTTCCAGGC TATCCTGCCG CTCAAGGGCA AAATTCTGAA CGTCGAAAAA
GCCCGTCTGC ACAAAATGCT TGAGAATGAA GAGATAAAAA CAATCATACT CGCGCTCGGC
ACAAGCTTCG GGGAAGAAGA ATTTTCAGTG GAAAAACTAC GGTACGGCAA AATAATCATC
ATGACTGATG CTGACGTGGA CGGAGCCCAC ATCAGAACAC TGCTCCTGAC CTTCTTCTTC
CGATACATGC GGTCCCTGAT AGAGGCAGGC AAGGTCTTCA TCGCCCAGCC TCCACTCTAC
CTCATCAAGT CAGGTAAGGA GCAAAAATAC GCATGGGATG ACGATGAACG CAACGGCATT
GTCGAGTCCA TCAGGAAAAA GCAGAAAGGG AGAGGGAATA TTAACATTCA GCGCTACAAA
GGTCTGGGTG AAATGAACCC TGAACAACTC TGGAGCACAA CCATGGATCC GGAGCACCGT
TCGCTGTTAC AGGTGTCCGT TGAAAATGCC ATGGAAGCCG ATCAGGTCTT TTCGACACTT
ATGGGGGACA AGGTCGAACC ACGCCGAAAC TTTATTGAAA AAAACGCCCG CTATGTCAGA
CGTTTAGATG TCTGA
 
Protein sequence
MSEIQKNTSP QAYEATNIQI LDGIEHVRKR PAMYIGDLHS RGLHHLIYEI VDNSIDETLA 
GYNESIELSL NPDGSVTVTD NGRGIPVDIH PQKKKSALEL VMTLIGAGGK FDKGAYKVSG
GLHGVGASVV NALSEWCEVE VYREGNIWFQ RYHKGIPQRD VEVIGESTKT GTKTTFMPDP
DIFKITEFRK DIVVDRMREL AFLNNILKIV VKDIDGSEET FHYEGGIKEF VTFTDHNRIS
LLKEPVYISG ERDSTVVEIA LQYNDSYQEN VFSYVNNINT HEGGTHVTGF RKALTRTLNS
YAQKNDLLKN LKLSLTGDDF KEGLTAIISV KVAEPQFEGQ TKTKLGNSET QSIVESIVNE
QLSDFAESNP GVLKTIIEKV KSAALSRDAA RKAKDLTRRK SALESSGLPG KLADCSINDP
EHCELYIVEG DSAGGSAKQG RDRSFQAILP LKGKILNVEK ARLHKMLENE EIKTIILALG
TSFGEEEFSV EKLRYGKIII MTDADVDGAH IRTLLLTFFF RYMRSLIEAG KVFIAQPPLY
LIKSGKEQKY AWDDDERNGI VESIRKKQKG RGNINIQRYK GLGEMNPEQL WSTTMDPEHR
SLLQVSVENA MEADQVFSTL MGDKVEPRRN FIEKNARYVR RLDV