Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0007 |
Symbol | |
ID | 6373649 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 7022 |
End bp | 9412 |
Gene Length | 2391 bp |
Protein Length | 796 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 642682528 |
Product | DNA polymerase B region |
Protein accession | YP_001958477 |
Protein GI | 189499007 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0417] DNA polymerase elongation subunit (family B) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACA ACCAACAGAA CAACATCGTT TTGAACCCTC TTCTGTTCGG TAAGGATGAG GAGGAAAAAA TCGTAGGCAT TCACCAGTTA CCGGACAATA AGGTCAGGCT GTACATCAGG GATGAAAACG GGATCAGCAG CCGTGACGAA GCGTTTTACC CCTTCTTTTT TCTTTCAGAA GAGTCCTTAC TTGACGGGTT TACTCCTGTA AACAGTGAGA AATTCTGGCT CATAAAACTT CAAGGCGGGA ATTTCTATCG ATTCCTTGCG ATTTTCAAAA CACAGCAAAA CTGTAGAAGT GCCCTTGAGT ATATCGCATC AAAATCAGCT GTCGATTCTG AGGAAGAGGA TGATTCCGGC TTTTCAAGCA ACCTGACCTA CAGCAGGGGA GATGCTGTAA CGCAATACCT GCTCCAATCA GGCAAGACGC TTTTTAAAGG CATGGTGCTT GAAGATCTTC ACAGAATGCA GCTCGATATT GAGACCTATT ACAAACCCGA AAAAAACACG CGCAGCAAGG TTTCAATTGG AAGTGACCCG ATAATCATCA TATCTCTCAG CGATAATAAG GGCTGGGAGC ATAGTATTCA TTCCAGAGAT ATATCTGAAA AAGAGTTGTT GGAAAAGCTG ATTTCCATCA TCCGGTTGAA AGATCCTGAT GTTATCGAGG GACATAATAT CTTCAGTTTT GACCTCCCTT ACATACAGAG AAGATGTGAA ATACTTGGTG TGGAGTTCAG GATAGGGCGT GACGGATCTA TACCAAGAAG TTATCAATCC AGCATCCGAT TTGCTGAACG GTCGATTGAC TACCCCTTTT TCGACATCGC AGGCAGACAT GTTGTAGACA CCCTGTTTCT TGTTCAGAAT TATGATGTGG CAAAACGCTC GATGCCTGGT TACGGCCTTA AAGCAGCAGC CAGATATTTC GGCTTTGCGT CGCCAGACAG AACCTATGTT GAATACAGTG ACATTGCCGA TCTCTGGAAC AACAACCCTG AACGACTTCT GAACTACGCT CTCGATGATG TGCGTGAAAC ACAAAAGCTT GCAGCAATGC TTTCAGGCAG CAACTTCTAC ATGACCAGAA TGATGCCCTA TACCTATGCA CAGACATCGA GAATGGGGCC TGCGGCAAAG ATAGAGGCCC TGTTTGTAAG GGACTATCTC AAAGAAAAGC ATTCACTTCC AAAACCGGAA ACAGGTCAGC AGCACTCCGG TGGGTTCACC GAAGTCTTTC TTAAAGGTAT TCTCGGACCA ATAGTCTATG CTGATGTAGA ATCTCTCTAT CCATCAATTA TGCTCTTCTA TGATATCTGC CCTAAAAGCG ATGAACGGAG GATATTTCCT GAAATTCTGA GTAGCCTGAA AGAGCTCCGT TTTGCAACAA AAAGCAAAGC AAAGGAGGAA AAAGAGAAGG GGAACAAGGA TCTTTCGGAC AATTACGATG CGATGCAGTC ATCATTCAAG ATATTGATTA ACGCAATGTA CGGCTATCTT GGATACAGTG CAGGCATATT CAACGATTAC GAAGAAGCCG ACAGAGTAAC AACGACCGGT CAGGAGATTG CGCGCAGGAT GATCAAAGAA TTTGAATCGA GAGGTTGCAA GGTTATCGAA GTGGATACTG ACGGCATACT TTTCGTTCCG CCACCTCATG TTCAGTCACA AGAAGATGAA ATCAAACTCG TAAAGGAGGT TTCCGCGGTA ATGCCCGACG GTATCACTAT AGGATATGAC GGACGATACA GAAAAATGAT ATCCTATCTG AAAAAAAATT ATGCTCTTCT CAACTATGAT GGCACCATAA AACTTAAAGG ATCCTCGCTC ATAAGCAGGA GCGGTGAAAA ATTCGGACGC GATTTTATCC GCAAAGGGTT TGAAAAACTT CTTGAAGAAG ATGTTCAGGG CCTGCACGAC CTCTATGTTT CATTCAAGGA GATGATTATG AATCATAGCT GGTCCATAGA AGATTTTTCA AGGACTGAGT CACTGAAAAA CACTCTGGAG CAATACATTA CCGATACATC TTCAGGAAAA AGAAGCCGTT CGATAACCTA TGAGCTTGCG CTGAAACATA AACTGAGCGT CAATAAAGGG GACAGAATAA CATACTATGT AGCCGGAAGC GGACTGCAAA GCAGCCACTA TGAAAAAGGG CGCCTTGCTG ATGACTGGGA CAGCTCCAAA CCGGATGAAA ACACGCAGTT TTACACAAAA AGACTTGATG AATTCTCACA GAAATTTCTC CCTTTTTTCA AACCACAGGA TTTCAGTTCA ATTTTCTCCT CGGATACATT ATTTTCATTT TCTCCTGAAG GTATAGAGCT TATCAAAGAG ATCAGAAACA AGGATACTGA TTCATTTGAT GATAACGATA TACCATTTTA A
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Protein sequence | MSNNQQNNIV LNPLLFGKDE EEKIVGIHQL PDNKVRLYIR DENGISSRDE AFYPFFFLSE ESLLDGFTPV NSEKFWLIKL QGGNFYRFLA IFKTQQNCRS ALEYIASKSA VDSEEEDDSG FSSNLTYSRG DAVTQYLLQS GKTLFKGMVL EDLHRMQLDI ETYYKPEKNT RSKVSIGSDP IIIISLSDNK GWEHSIHSRD ISEKELLEKL ISIIRLKDPD VIEGHNIFSF DLPYIQRRCE ILGVEFRIGR DGSIPRSYQS SIRFAERSID YPFFDIAGRH VVDTLFLVQN YDVAKRSMPG YGLKAAARYF GFASPDRTYV EYSDIADLWN NNPERLLNYA LDDVRETQKL AAMLSGSNFY MTRMMPYTYA QTSRMGPAAK IEALFVRDYL KEKHSLPKPE TGQQHSGGFT EVFLKGILGP IVYADVESLY PSIMLFYDIC PKSDERRIFP EILSSLKELR FATKSKAKEE KEKGNKDLSD NYDAMQSSFK ILINAMYGYL GYSAGIFNDY EEADRVTTTG QEIARRMIKE FESRGCKVIE VDTDGILFVP PPHVQSQEDE IKLVKEVSAV MPDGITIGYD GRYRKMISYL KKNYALLNYD GTIKLKGSSL ISRSGEKFGR DFIRKGFEKL LEEDVQGLHD LYVSFKEMIM NHSWSIEDFS RTESLKNTLE QYITDTSSGK RSRSITYELA LKHKLSVNKG DRITYYVAGS GLQSSHYEKG RLADDWDSSK PDENTQFYTK RLDEFSQKFL PFFKPQDFSS IFSSDTLFSF SPEGIELIKE IRNKDTDSFD DNDIPF
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