Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0006 |
Symbol | |
ID | 6373648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 5622 |
End bp | 6899 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 642682527 |
Product | beta-lactamase domain protein |
Protein accession | YP_001958476 |
Protein GI | 189499006 |
COG category | [C] Energy production and conversion |
COG ID | [COG0426] Uncharacterized flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCATT CCGGATATTT TTATAAAGTC TTAATAAATA TAGAACCCTG TATTATGATT GATGATAAAA TTCTTCCTGT AACGGATGAC GTCACCTGGA TTGGCGTTCT CGATCCCGGT CTTGTTACCT TCGATATCGT CATGGAGACA AAGTATGGTA CAACATACAA TTCCTACTTT ATCAATGCAG AAAAAAAGGC GGTCGTTGAA ACCACCAAAG AACGGTTCTG GCCGACTTAT CTCGATAAGA TAAAACAGGT TACTGATCCT TCAGAGATTG AGTATATCAT TGTTGACCAC ACTGAACCGG ATCATTCCGG AAACATTAAA AATCTTCTGA GTGTCGCACC TGACGCGACC GTGGTAGGAA GTGCCAACGC TATAAAATTC CTCAATGATC TTGTAGGCGT CGAGTTCAAG TCACTGATTG TCAAGGATGG CGATACACTT GACCTGGGAA ATAAAACACT TCGATTTATC AATGCGTTAA ACCTGCACTG GCCTGATGCA ATCTATACAT GGCTTGAAGA AGATAAGGTG CTTTTCACCT GTGACTCATT CGGATGCCAC TACTGTAATG AAGCGATGTA TGATGATCTT TGCGGTGATT TCGACGATGC ATTCACCTAT TATTTCGATG CGATCCTGAA ACCGTTCAGC AAGTACATGC TGCAGGCTAT AGATCGCATA AAGGATCTCG ATATACAGGT TATCTGCCCT GGCCACGGAC CTATACTTCG TTCAGACTGG AAAAAGTATG TGGATCTTTC AAAAAAATAT TCACAAAGCG CTATAGCGCT GCCAAACGAG AAAAATATAC TTGTAGCATA TGTCTCGGCT TACGAGAATA CAACGCTCAT CGCGGAAAAA ATCGCTGAAG GACTCCGCCC TGCATGTGAC TTTACGGTGG ATGTGTGCGA TATCGAGAAT ATGCACTTTT CAAAAATCGA AGAAAAGATT GCTCACAGCT CAGCCATCAT TGTTGGTTCG CCAACCATTA ACCAGAACAT AGTATCCCAG ATCTATCAGT TCTTTGCTGC CATCAATCCT ATTCGTGACA AGGGAAAACT TGCAGCGGCC TTCGGTTCTT ATGGCTGGAG CGGAGAAAGC ATCAAAATTA TTGAATCCAA CTTTACCAAC CTGAAACTCA AGGTATTTGA TCAGAATCTG AGAATTAAGT TCAAACCGGA TGAAAAAGAG TTTGAAGAGT GCAAGGCATT CGGTAAAGCC TTTGCTGAAA GGCTTATAGA GAAAAACAAT ATTGTCTGTG ATATGTAG
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Protein sequence | MRHSGYFYKV LINIEPCIMI DDKILPVTDD VTWIGVLDPG LVTFDIVMET KYGTTYNSYF INAEKKAVVE TTKERFWPTY LDKIKQVTDP SEIEYIIVDH TEPDHSGNIK NLLSVAPDAT VVGSANAIKF LNDLVGVEFK SLIVKDGDTL DLGNKTLRFI NALNLHWPDA IYTWLEEDKV LFTCDSFGCH YCNEAMYDDL CGDFDDAFTY YFDAILKPFS KYMLQAIDRI KDLDIQVICP GHGPILRSDW KKYVDLSKKY SQSAIALPNE KNILVAYVSA YENTTLIAEK IAEGLRPACD FTVDVCDIEN MHFSKIEEKI AHSSAIIVGS PTINQNIVSQ IYQFFAAINP IRDKGKLAAA FGSYGWSGES IKIIESNFTN LKLKVFDQNL RIKFKPDEKE FEECKAFGKA FAERLIEKNN IVCDM
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