Gene Cphamn1_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0006 
Symbol 
ID6373648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp5622 
End bp6899 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content42% 
IMG OID642682527 
Productbeta-lactamase domain protein 
Protein accessionYP_001958476 
Protein GI189499006 
COG category[C] Energy production and conversion 
COG ID[COG0426] Uncharacterized flavoproteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCATT CCGGATATTT TTATAAAGTC TTAATAAATA TAGAACCCTG TATTATGATT 
GATGATAAAA TTCTTCCTGT AACGGATGAC GTCACCTGGA TTGGCGTTCT CGATCCCGGT
CTTGTTACCT TCGATATCGT CATGGAGACA AAGTATGGTA CAACATACAA TTCCTACTTT
ATCAATGCAG AAAAAAAGGC GGTCGTTGAA ACCACCAAAG AACGGTTCTG GCCGACTTAT
CTCGATAAGA TAAAACAGGT TACTGATCCT TCAGAGATTG AGTATATCAT TGTTGACCAC
ACTGAACCGG ATCATTCCGG AAACATTAAA AATCTTCTGA GTGTCGCACC TGACGCGACC
GTGGTAGGAA GTGCCAACGC TATAAAATTC CTCAATGATC TTGTAGGCGT CGAGTTCAAG
TCACTGATTG TCAAGGATGG CGATACACTT GACCTGGGAA ATAAAACACT TCGATTTATC
AATGCGTTAA ACCTGCACTG GCCTGATGCA ATCTATACAT GGCTTGAAGA AGATAAGGTG
CTTTTCACCT GTGACTCATT CGGATGCCAC TACTGTAATG AAGCGATGTA TGATGATCTT
TGCGGTGATT TCGACGATGC ATTCACCTAT TATTTCGATG CGATCCTGAA ACCGTTCAGC
AAGTACATGC TGCAGGCTAT AGATCGCATA AAGGATCTCG ATATACAGGT TATCTGCCCT
GGCCACGGAC CTATACTTCG TTCAGACTGG AAAAAGTATG TGGATCTTTC AAAAAAATAT
TCACAAAGCG CTATAGCGCT GCCAAACGAG AAAAATATAC TTGTAGCATA TGTCTCGGCT
TACGAGAATA CAACGCTCAT CGCGGAAAAA ATCGCTGAAG GACTCCGCCC TGCATGTGAC
TTTACGGTGG ATGTGTGCGA TATCGAGAAT ATGCACTTTT CAAAAATCGA AGAAAAGATT
GCTCACAGCT CAGCCATCAT TGTTGGTTCG CCAACCATTA ACCAGAACAT AGTATCCCAG
ATCTATCAGT TCTTTGCTGC CATCAATCCT ATTCGTGACA AGGGAAAACT TGCAGCGGCC
TTCGGTTCTT ATGGCTGGAG CGGAGAAAGC ATCAAAATTA TTGAATCCAA CTTTACCAAC
CTGAAACTCA AGGTATTTGA TCAGAATCTG AGAATTAAGT TCAAACCGGA TGAAAAAGAG
TTTGAAGAGT GCAAGGCATT CGGTAAAGCC TTTGCTGAAA GGCTTATAGA GAAAAACAAT
ATTGTCTGTG ATATGTAG
 
Protein sequence
MRHSGYFYKV LINIEPCIMI DDKILPVTDD VTWIGVLDPG LVTFDIVMET KYGTTYNSYF 
INAEKKAVVE TTKERFWPTY LDKIKQVTDP SEIEYIIVDH TEPDHSGNIK NLLSVAPDAT
VVGSANAIKF LNDLVGVEFK SLIVKDGDTL DLGNKTLRFI NALNLHWPDA IYTWLEEDKV
LFTCDSFGCH YCNEAMYDDL CGDFDDAFTY YFDAILKPFS KYMLQAIDRI KDLDIQVICP
GHGPILRSDW KKYVDLSKKY SQSAIALPNE KNILVAYVSA YENTTLIAEK IAEGLRPACD
FTVDVCDIEN MHFSKIEEKI AHSSAIIVGS PTINQNIVSQ IYQFFAAINP IRDKGKLAAA
FGSYGWSGES IKIIESNFTN LKLKVFDQNL RIKFKPDEKE FEECKAFGKA FAERLIEKNN
IVCDM