Gene Aasi_1948 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1948 
Symbol 
ID6377542 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand+ 
Start bp1793467 
End bp1794159 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content32% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003573277 
Protein GI294661401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.840163 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCTACA AATTACTTAT TAATAGACTG CTGTTAACCA TGCTAGTATG TACAACCATT 
AATTATGTAA AAGCTAGACC ATCTCATAAT ATAAGCCAAC CCTCTTTTGG GATAAAATTG 
GGAATAAGTT TTAACAGAAC TAATATGAGC CAAAATATAC AAAAGAGGGT TTTAAATTGG 
CAAAAAATTA CCGTAAGTTC TGGAAATATT TTCTGGATTA TGGGTGGACT AACTGGAGAA 
TATCCATTTA CATACCAATT TGCTGCAGCT ATAGAAATAA TATATGAGAG AAAAGGTTGC 
CAGCAACTTC AATTAAGACG ATATGAAGAA AGTATTTCAT TACCTATATT ACTTAAATAT 
TATCCTAAAT CCATAAAAAA AGGAGTTAAC CTACAACTAG GAATTCAGCC TAGCTTGGTC 
TTATCTAAAA GATATTTTCG ATTAGAAATA GATAATTCAA AAAAAACGGA AATAAAAGAA 
GAAGATTTAG AGAATGAGGA GATAACGAGA TCATTTGATT TAGCAATTAT TGGTGGCATA 
GAATATGCTT TCAAAAATGG CTTAAAGTTA GGTACTCGTG TAAGCATGGG AATTTTAGAC 
CGGTACAATG CTAAAGGACA AGACCGGGTT GCTACAACTT ATTCAGCAGG AAACCAACTT 
TATATAGGGT ATAATATTGC ACAATGGTTT TAA
 
Protein sequence
MCYKLLINRL LLTMLVCTTI NYVKARPSHN ISQPSFGIKL GISFNRTNMS QNIQKRVLNW 
QKITVSSGNI FWIMGGLTGE YPFTYQFAAA IEIIYERKGC QQLQLRRYEE SISLPILLKY 
YPKSIKKGVN LQLGIQPSLV LSKRYFRLEI DNSKKTEIKE EDLENEEITR SFDLAIIGGI 
EYAFKNGLKL GTRVSMGILD RYNAKGQDRV ATTYSAGNQL YIGYNIAQWF