Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_1680 |
Symbol | |
ID | 8999640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | + |
Start bp | 924356 |
End bp | 927178 |
Gene Length | 2823 bp |
Protein Length | 940 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | |
Product | Sel1 domain-containing protein |
Protein accession | YP_003573105 |
Protein GI | 294661229 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.428252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTTCTA TCAAAAAAAA TAAAATATTA GTAGCTGATT GGGACTATAG ACACGAAAAC AAGAATACAA GGCCGAAGAC AAAAGACAAA AAGTATTATG CCAATCATGA AAATAACTAT TCAAAAATAC AATATACAGC AGATGAATGT GCTAAGGAAT TTTATGGAGA TATCGCTATA TGGGGTAGAC CTTGGGTAGA AGGAATAATG CTATGTCAGA AGCTAGAACT TGAGGGGATT ATCAGTATAG AAATACTGAT AAATCCAGAT ACAAAGCAGC AAATCATTTC CTATTATTTA ACAACTAATT CAAAATATAA ACAGATTAAC GAGGAAGTTC TTAAACAACT GATGGGCTCC AAAAGGGTTC CTATAATAAT TAATAAACAA GACAACCTGC ATTTTGTCCC TTTGCTTTTA AAAGAATCAA CATCTCAAAG CTCGTCCAGT AGCTCTTCTT CTAGTTCCGG TGCAATAATA ACTACCCCCT CACCTAACAA AAAGAGAGGA GCCGATACAG AAACTTCCCA AAAGAACCCT GTTAAACGAG CTAGGCCAGA TATTACTTAC TTACCACAAG AAGAGTTAGA AAGCTCATGT ACAAAAGCCG ATGAATTTTT AGAAGGATAC AATCAGAAAG AAGAAAAAAC TCTTTTAGAT AGGGCAATCA AACTTTATAA ACAAGCTGCA GAAAACGGTT ACAAAGCTGC GCAAGACAAG TTGGTAACAT TGAGAGATAA AGGATTATAT CAGAATCTTG ACCTAGAAGC CATGGCATCT TATACAGAGG CAATTAAAGG AGCTATGGAC GACCATTTTG CTAAACCTGC AGGGAAAATA AAAGAATTTA TTAACCATGC AAGAAACAGG CGCCGTGATT ATGAGCGAAA GTATCAAGAA CGTCTTAAAA ACAAAGCACC AGCCACCCCT GAGAAAAAAG GAAAAAAGAA ATCTATAAAA CAAACTGCTG AAGGCCGAAG CCATCATCCT CCTATGCGTA TTTCTGACTT AATTGTTATG GATCTTGATA TTTTTAGAAC CCCTAAACGT ATTATATGGG GAGGTAATCC AAAACAATTA CCCAACGCAC AATATATCTA TGGTCCTTTA TTTAGAGATT CTAAGACATT AAAGTATGAT TTTAAAGTTC TAGCTGTTGA CACTTCTGGT TCGGGAGGAG ATGAAACTAC TTATTGTGTT GCTAAGCGCA GGGGAGACTA TTACTTTATT GCTGAGGTAG GAGGGTTAGG AGGTGGATAT GAAGATAAAA CAAAAGACAC TAAGGCCAGT GTAGGCAATA AAGAGTCAAT TTTAGATGAA TTAGTAAGGC TAGCCATAAA GCATCAAATA AACGTTATTA CTGTAGAAAC TAATAAAGAT CCTGCCTTTG TAAGACTTTT AGAGAAAAAG TTAGGGCCTA AGCAAAAAGA GATAAAAATT GAAACCAAAC ATCAATCACG AAATAAAGAG GCCCGAATTA ATGAGGTGCT GCAGCCGCTA TTAAAAACCC ATAAGCTTAT TATAAGTAAA GAAGCATTAA TAAATGATTT TAGCTCCGCT CCTCAGGATG ATTTATATTT CAAATTTTTT TACCAATTAA TGGCTTTAGT TGAAGATAAC TTATCATCTG GGAAATATTT TGATAATGGA AAACTTCAGC ATGATGATCG AATAGATGTG GTAGCTAGCG CCATGATTTT ATTAAAAGAG AAAAGCCAAA ATGCCCCTAC TAAACAAACT AGAAAAAGCT ATTTAAGAGA GCTCAAAAAA GAGGCTAAAA AAGGCAATAT TAAGGCACAA CTAGAGCTAG GCCGGAACTA CAAAGCAGGT CTAGGCGTAG AAGAAGACTT AGATGAGGCA GAAAAATGGC TACGAATAGC TGCTGAAAAA TACGATAATC CAGATGCACA GTTTGAGTTA GCTGAAATAC TACCTTCAAT TAAAGAAGAT GAGAAATTCA ATTTCTATTC TAAGTCTGCT AGTAACGGTC ATGTACCAGC AATGTACAAG TTAGGTGAAA CATATAGTAT AGGATCTGAA TTAGTTGCAA AAGATGAGAA TGAAGCAATA AGATGGTATA CTGAAGCAGC CTCCAAAGGA CATGCAGCTG CGGCCTATGC ATTGGCTAAA ATATATTTAA ATGGATCTGC TACAATTAGG CAAGACAAAA AAGAGGCATG GAGGTGGTGC GAAATAGCAG TAAAACTAGG TCACCCAAAG GCAATGTATA AAGTAGCCCA AAAACATGAA CAAGATAAAA ATGACATAGA AGCATTTAAA TGGTACTTAA AAGCTGCAAA AAACAACTAC GCTAAGGCAC AATTCTTAGT AGGAAGCAAA TATGATGAAG GAAAAGGTGT AGCACAGGAT TATCAAGAAG CATTTGTCTG GTATGAAAAA GCTGCCCAGT CAGATGAGCC ACGAGCACAA TATGGGCTTG CACAAATCTA CTGGCAGGGG CGTGTGCATA ATAGACAGGA TAAAGAAAAA GCAATTTTTT GGTTCCATAA AGCTGCTGAA CAGGGTTATG TGGAGGCACA ATTCATATTA GGAAATATTT TCCAAGAGCA AAATGATTAT AAAAAGGCTA CTGTATGGTA TAAAAGAGCT GCTGATGAGC AACATAAGCT AGCAATATTT AGTTTAGGAA CTATTTATGA AGAGGAAAAG AAGTATAAAG AGGCTTTTGA ATGTTATAAG GAGGCATCTG AACTTGATTT GGCAGAAGCC AACAATAAAA TAGGACATTT TTATCACCAT GGATGGGGGG TGGAACAAGA TCGAAAAATG GCATATTATT TTTTTACTAA AACAAATACA TAA
|
Protein sequence | MSSIKKNKIL VADWDYRHEN KNTRPKTKDK KYYANHENNY SKIQYTADEC AKEFYGDIAI WGRPWVEGIM LCQKLELEGI ISIEILINPD TKQQIISYYL TTNSKYKQIN EEVLKQLMGS KRVPIIINKQ DNLHFVPLLL KESTSQSSSS SSSSSSGAII TTPSPNKKRG ADTETSQKNP VKRARPDITY LPQEELESSC TKADEFLEGY NQKEEKTLLD RAIKLYKQAA ENGYKAAQDK LVTLRDKGLY QNLDLEAMAS YTEAIKGAMD DHFAKPAGKI KEFINHARNR RRDYERKYQE RLKNKAPATP EKKGKKKSIK QTAEGRSHHP PMRISDLIVM DLDIFRTPKR IIWGGNPKQL PNAQYIYGPL FRDSKTLKYD FKVLAVDTSG SGGDETTYCV AKRRGDYYFI AEVGGLGGGY EDKTKDTKAS VGNKESILDE LVRLAIKHQI NVITVETNKD PAFVRLLEKK LGPKQKEIKI ETKHQSRNKE ARINEVLQPL LKTHKLIISK EALINDFSSA PQDDLYFKFF YQLMALVEDN LSSGKYFDNG KLQHDDRIDV VASAMILLKE KSQNAPTKQT RKSYLRELKK EAKKGNIKAQ LELGRNYKAG LGVEEDLDEA EKWLRIAAEK YDNPDAQFEL AEILPSIKED EKFNFYSKSA SNGHVPAMYK LGETYSIGSE LVAKDENEAI RWYTEAASKG HAAAAYALAK IYLNGSATIR QDKKEAWRWC EIAVKLGHPK AMYKVAQKHE QDKNDIEAFK WYLKAAKNNY AKAQFLVGSK YDEGKGVAQD YQEAFVWYEK AAQSDEPRAQ YGLAQIYWQG RVHNRQDKEK AIFWFHKAAE QGYVEAQFIL GNIFQEQNDY KKATVWYKRA ADEQHKLAIF SLGTIYEEEK KYKEAFECYK EASELDLAEA NNKIGHFYHH GWGVEQDRKM AYYFFTKTNT
|
| |