| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1436 |
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| Symbol | |
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| ID | 6377502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | + |
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| Start bp | 1848275 |
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| End bp | 1850722 |
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| Gene Length | 2448 bp |
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| Protein Length | 815 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642682507 |
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| Product | hypothetical protein |
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| Protein accession | YP_001958456 |
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| Protein GI | 189502739 |
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| COG category | [A] RNA processing and modification
[T] Signal transduction mechanisms |
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| COG ID | [COG5238] Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0147013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTA AACCATTACA GAAACTTGTA GCGCGTATTC TACTAATAAG CCTTATTTCA
CAAAGCTGCT CTAATTCCTC TAACCTACCT ATTTCAATAA AAAAGTCAAC AGATGACAAC
CAACAAGTTG TTATTGAACA GTTAGTAAAC AAGCAACTTG CCTCCAAGAA AGGTCATCTA
ATTACTTTTT ATGAAGAAGC AGGCCAATTG CGAGTAAAAT TCAAGGAAAA GGTTGGAAGC
TTTAGTAGAA TACATACTTT ACCTGTGTAT ATAGAGCAAG GTATTGAGAT AGCACCAGTA
GCTAACTCTA AAGGGAGCCA AAATCTACTT ACGCATGTGC ATTTACCTAA AAACAAGCAG
CCAGGCTATG TATATATAGG GAATATGGGG TTAAAAGGAG GCGTAGGGAG CGAAGATGAA
CAAGAGGACG AAGAGCCAAA GCAAGAAAAA AGAAAAGGTA AAAAGAGAGT GAAAGGTGAA
AAAGAATATG AAAAGAAGGA AGAAGATCGA TATCAGAAGA AAATAAAAGT AAGAAGAAGA
GGAAAAGAAG AGCAAGAATC TGCAAAATTT AAGCGAAGAA GAGTATCACC TTATTCCTCG
TTCGGAGAAG AACAAACCAT AGAACAACCA GGCAAGAATA ATTTAGAAGA ATATCAAACC
TTACTGCGAT CTGGCATGGA GGGAGAAAGT GAAGCACAAT TTCGGCTAGG GAGAAAGGCG
TACGAAGCTT GGCAGAAGCA AGGTACAGAA GAATCTGCTC ACAAAGCAGA AGTGTGGTTA
AGCAAAGCAG CGGCACAAGA CCATCCAATG GCAATTACTT TATTAAGAGA GCTAGCGGAT
AGTAGCTCTT CTGTGGAAAA GGACATTGTG CAGAGTTCTG TATCCCTTCC CATAGAGCTA
TGGCAAGAGA TTTTTTCTTA TTTAAAATTA GAAGATATTT TACCAGCAAG AATAGTTAAT
AAAGACTGGA ATGAACTGAT TACAGGCTAT AGGCAAACAG GTATAGTAGG GGTTGAGAAT
AAGCTTAAAT CAGTTGTTAA TCCAACTGGC TGGGTATGGA CAATAGATAA GAGAATAGAT
TTCAAGAACA ATAAAAAGTT AAATAAGTTA ACACCTGAAA GAATTTCCAG TTTTGCTTTT
TATCATTTAA TAAGGAATAT AAAGAGTTTG CCACAAGCAT TTTGGCCTCA TATAAAAGGT
ACCAAGATTC AGAGTATTGA TTTAAGCGAG AATGAGATAG GTGCCCAAGG AGCAGTTAAG
TTGGCTAAAT ATTTACAAGA TACCCAAGTA CATACGGTTT ATTTAAGTTT TAATGGTATA
GGTGCTCAAG GAGCAGTTGA GTTTACTAAA AATTTACAGG GAACGAGGGT TCATACGGTT
GACTTAAGCT GGAATAGAAT AGGTGCTCAA GGAGTGGAAG AATTAATTAA ACATTTACAA
GCTACCAAAG TGCATACGGT TAATTTAAGG TTAAACCAAA TAGGCGCTCA AGGAGTAGAA
GAATTGGCTA AAAATTTACA GGGAACAAGT GTACATACAG TTAATTTAAG CGAAAATCAT
ATAGGTGATC AAGGAGCCGA GGAATTATTT AGGTATTTAC AGGGAACTCG AGTACATACG
GTTTATTTAA GCTCGAACCA AATAGGCGCA CAAGGGGCAG AAAGATTGGC TAAACAATTA
CTAGGAACCA GTGTACATAC AATTGATTTA AGCGGGAATC ATATAGGCGA CCGAGGAGCC
GAAGGATTTG CCCAGCATTT ACAGAGAACT AGTGTACATA CGGTTGATTT AAGCGAAAAT
CATATAGGCG ACCGAGGAGC CATAGAGTTT GCCAAAAATT TGCAAGGAAC AAGTGTGCAT
ACGGTTTATT TAAATCATAA TAAAATAGGT GCACAAGGAG CTATAGAATT GGCTAAGCAT
TTACAGGGAA GTAGTGTACA GAAGATTAAT TTAAGCCATA ATCAGATAGG TGCACAAGGA
GCCGAAGGAT TGGCTAAACA TTTACAGGGA ACCCAAGTAC ATACGATCAA TTTATGGGCG
AATCAGATAG GCGCCCAAGG AGCCGTAGAG TTTGCCAAGA ATTTACAAGG AACAAATGTG
CATACGGTTT ATTTAGGATA TAATCAGATA GGTGCACAAG GAGCTGAAGG ATTGGCTAAA
AATTTACAGG GAACCAGCGT ACATACAGTT GATTTAACCT CGAATCAAAT AGGCGACCAA
GGAGCGGAAG GTTTGGCTAA GTATCTACAG GGAACACAGG TGCATACGGT TAATTTAAGT
TCGAATAATA TAGGCGCACA AGGAGCGGAA GAATTGGCTA AAAGTTTACA AGGAACCAGT
GTACATACAG TTGATTTAAG ATGGAATGAT ATAGGCGCTG ATATACAAAG ATTACTCGTG
GAACAATATC CGCATATTAA ATGGAGCTTT TCGCCTGTCT TCTTTTAA
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| Protein sequence | MKPKPLQKLV ARILLISLIS QSCSNSSNLP ISIKKSTDDN QQVVIEQLVN KQLASKKGHL
ITFYEEAGQL RVKFKEKVGS FSRIHTLPVY IEQGIEIAPV ANSKGSQNLL THVHLPKNKQ
PGYVYIGNMG LKGGVGSEDE QEDEEPKQEK RKGKKRVKGE KEYEKKEEDR YQKKIKVRRR
GKEEQESAKF KRRRVSPYSS FGEEQTIEQP GKNNLEEYQT LLRSGMEGES EAQFRLGRKA
YEAWQKQGTE ESAHKAEVWL SKAAAQDHPM AITLLRELAD SSSSVEKDIV QSSVSLPIEL
WQEIFSYLKL EDILPARIVN KDWNELITGY RQTGIVGVEN KLKSVVNPTG WVWTIDKRID
FKNNKKLNKL TPERISSFAF YHLIRNIKSL PQAFWPHIKG TKIQSIDLSE NEIGAQGAVK
LAKYLQDTQV HTVYLSFNGI GAQGAVEFTK NLQGTRVHTV DLSWNRIGAQ GVEELIKHLQ
ATKVHTVNLR LNQIGAQGVE ELAKNLQGTS VHTVNLSENH IGDQGAEELF RYLQGTRVHT
VYLSSNQIGA QGAERLAKQL LGTSVHTIDL SGNHIGDRGA EGFAQHLQRT SVHTVDLSEN
HIGDRGAIEF AKNLQGTSVH TVYLNHNKIG AQGAIELAKH LQGSSVQKIN LSHNQIGAQG
AEGLAKHLQG TQVHTINLWA NQIGAQGAVE FAKNLQGTNV HTVYLGYNQI GAQGAEGLAK
NLQGTSVHTV DLTSNQIGDQ GAEGLAKYLQ GTQVHTVNLS SNNIGAQGAE ELAKSLQGTS
VHTVDLRWND IGADIQRLLV EQYPHIKWSF SPVFF
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