Gene Aasi_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1425 
Symbol 
ID6377521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand+ 
Start bp1830911 
End bp1831555 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content31% 
IMG OID642682495 
Producthypothetical protein 
Protein accessionYP_001958445 
Protein GI189502728 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2834] Outer membrane lipoprotein-sorting protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.360648 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAAGA AATTAAGTTG CCTGGTTTTT ATATTATGTT GCTATTCATC TCCTAGCCTG 
GCAAAAATCA AACCACATAG CCAAGCAAGA AAAGTATTAG CGAACATTAA AACGCCCAAC 
AGCTTTCAAG CAGATTTTAT TTATACTAGA CAAGAAAAAG ATGCTGAAGA GCCACAACAA 
ATAAAAGGGA AGGTATGGGC AAAAGGCAAT AGATACAAAA TTGTATTAGA CGAGCAAGTT 
GTAATTAGTA ATGGAGAAAT TGTATGGAAT TATTTACCAG AACTTCATGA AGTACATATT 
AATAATTTTG AAGATGAAGA AGCAGCACTA TTTTCTCCGA TACAACTTAT GCATATACAC 
CAGCAAGGAT TTATACCTAT TGCTTTGAAG TCCATTACCA TTGATAAAAT AGAGTATGAT 
ATATTGGAAT TAATAGCTAG TGACCAAGAT AATTTTATTA AACACCTTAG CTTAACTATT 
GGAAGAAAAA GTCATCAAAT AAAGCACATT AAAGCTTTTG ATAACAATGA GATAACACAT 
AGCTTTATGA TCATGAATGC AGTGTTAGAT GTGGATTTAG AAGACAGCTA TTTTGAATTT 
GATACAACAG AATATACAGA TTTGGAGATA GTTGATTTAC GATAA
 
Protein sequence
MYKKLSCLVF ILCCYSSPSL AKIKPHSQAR KVLANIKTPN SFQADFIYTR QEKDAEEPQQ 
IKGKVWAKGN RYKIVLDEQV VISNGEIVWN YLPELHEVHI NNFEDEEAAL FSPIQLMHIH 
QQGFIPIALK SITIDKIEYD ILELIASDQD NFIKHLSLTI GRKSHQIKHI KAFDNNEITH 
SFMIMNAVLD VDLEDSYFEF DTTEYTDLEI VDLR