Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_1422 |
Symbol | |
ID | 6377524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | - |
Start bp | 1825284 |
End bp | 1826984 |
Gene Length | 1701 bp |
Protein Length | 566 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642682493 |
Product | hypothetical protein |
Protein accession | YP_001958443 |
Protein GI | 189502726 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.432451 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAAAA GATGGGTGTT TCAAACTATG CCAGAGCCTA CTGTGGTTGC ATCATTAGCC AATGCTATTG GCGTAGATAG CTCTATTGCT GCTTTATTGG TACAAAAGGG AGTAACTGAT TTTAATCAGG CAAAAGATTA TTTTAGACCT TCGTTAGCCG ATCTGCACGA TCCGTTTATT ATGAAGGATA TGGATAAGGC AGTAGGCCGT TTACTGCGAG CTATTGAGAA CCAAGAAGAA ATATTAATCT ATGGCGACTA TGATGTGGAT GGAGTTACAT CAGTATCGTT GGTATATGGC TTTTTGAAGC AATATCATAG TAAGCTACAA TTCTATATTC CAGATAGATA TAAAGAAGGT TATGGGGTTT CTAAGCAAGC TATCAACTGG GCTATTGAGA CAGGTATTTC CCTAATTATA ACATTAGACT GTGGTATAAA AGCCACAGAA TGTATTCAAC AAGCCCAGAT AGCAGGAATT GATGTAATTG TATGTGATCA CCATGAACCA GGTGAAGGCC TGCCACCTGC CTATGCAATT TTAGATCCTA AACAAAAAAC ATGTCCTTAT CCTTTTAAAG AGCTTTCTGG TTGTGGGGTT GGTTTTAAGT TACTTCAAGC TTTTGTATTA AAGCAAAACA TTTCATTAGA CATCCTCTAT CGATACCTGG ACTTAGTAGC TATTAGCATT GCCTGCGACT TAGTTCCACT CACGGACGAA AATAGAATAC TTGCTTACCA TGGACTAAAG CGCTTAAATA ATAGTCCTTC ATTTGGCATA CAAGCTATTA TACAAGTTGC TAATTTACCC TGGACATTAG GAATTTCACA ATTGGTTTTT GGTTTAGGGC CTCGCCTTAA TGCAGCAGGC AGGGTGGACC ATGGTAGCTT AGCTGTAAAT TTACTTTTGG CAGAAGATTC AGTGACTGCT AGCTCGCTAG CACGTCAGAT TGAAGACAAA AATGGTTTTA GAAGATACTT AGACAGTACT ATTACAGCAG AAGCACTTCA GTTGATGAAA GCTAGCGATG CAAGTTTAAT AGCTAAAACT ACGGTGCTTT TTAAAGAAGA CTGGCACAAG GGAGTAATTG GTATTGTTGC TTCTAGATGT ATAGAACATT ATTACCGTCC TACCATCATT CTTACAGCTT CTGGTAATAA GGCTACAGGT TCTGCACGTT CTGTGGCAGG CTATAATATA TATGAGGCCA TTACCGAATG TGCTGAGCTA TTGGAACAAT ATGGAGGGCA TGCCCATGCA GCAGGCCTTA CATTACCTTT AGAAAATATT ATATCTTTTC AAGAACGTTT TGAGCAAGTT GTCTCTAGCA CTATTTCGCA AGAATTGCTT ATTCCTGTTC AAAAAATAGA TTTGTTGCTG CCGCTTGAAA AGGTTACCAA TAAGTTTTAT AATATTCTTA ACCAGATGGC TCCTTTTGGT AATGGTAATA TGAGGCCTGT ATTTGCAACA GAGTTAGTGA TAGCTACTAA ATATAGAATT CTTAAAGAAA ATCATTTAAA ACTAACGGTA CAAGAACCTG CTTCAGGCAT CTGTATAGAC GCTATTGGTT TTGGATTAGC AAAATATGCC CATTTGGTGT GTGACCGTAA GCCATTTAAG ATAGCTTATA CCATAGAGAG AAATAATTAC CAAGGGCAAG TAAATTTACA ACTTAATATT AAAGGTTTAC AGCCAATATA G
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Protein sequence | MDKRWVFQTM PEPTVVASLA NAIGVDSSIA ALLVQKGVTD FNQAKDYFRP SLADLHDPFI MKDMDKAVGR LLRAIENQEE ILIYGDYDVD GVTSVSLVYG FLKQYHSKLQ FYIPDRYKEG YGVSKQAINW AIETGISLII TLDCGIKATE CIQQAQIAGI DVIVCDHHEP GEGLPPAYAI LDPKQKTCPY PFKELSGCGV GFKLLQAFVL KQNISLDILY RYLDLVAISI ACDLVPLTDE NRILAYHGLK RLNNSPSFGI QAIIQVANLP WTLGISQLVF GLGPRLNAAG RVDHGSLAVN LLLAEDSVTA SSLARQIEDK NGFRRYLDST ITAEALQLMK ASDASLIAKT TVLFKEDWHK GVIGIVASRC IEHYYRPTII LTASGNKATG SARSVAGYNI YEAITECAEL LEQYGGHAHA AGLTLPLENI ISFQERFEQV VSSTISQELL IPVQKIDLLL PLEKVTNKFY NILNQMAPFG NGNMRPVFAT ELVIATKYRI LKENHLKLTV QEPASGICID AIGFGLAKYA HLVCDRKPFK IAYTIERNNY QGQVNLQLNI KGLQPI
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