| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1399 |
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| Symbol | rplA |
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| ID | 6377580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | - |
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| Start bp | 1784783 |
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| End bp | 1785481 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 642682470 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001958424 |
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| Protein GI | 189502707 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAAC TAACAAGAAA GCAAAAAGCA GTCGCTGAAC AGTGTGACTT CCAAAAAAGC
TATAAACTAG AGGAAGCTAT AGAGCTTGTA CAAAAGATTA CTTATACAAA ATTTGATGCT
TCTATAGATA TTGCTGTTCA TTTGGGAGTA GATCCTAGAA AAGCAGATCA AATGGTTAGG
GGCACTGTCG TGTTGCCGCA TGGTACAGGT AAAAATAAGA GGATACTGGT ATTATGTACG
CCTGAAAAAG AAAAGGAGGC AAGAGAGGCA GGTGCTGACC ATGTAGGGTT AGATGATTAC
ATTAAAAAGA TAGAAGAAGG ATGGGTAGAT ATAGATGTTA TCATTACTAT GCCAGAGATA
ATGGCAAAAG TAGGAAGACT TGGAAAAATT TTAGGGCCTA GAGGGCTGAT GCCTAATCCT
AAAACAGGTA CCGTAACTGT AGAGATTGCT AAAGCTGTGC AAGCTGTCAA ATCTGGCAAG
ATCGAGTATA AAGTTGATAA ATACGGTATT GTTCATGCTA GTGTTGGTAG AGTTTCATTT
AGCAAAGAAG CCCTTAGAGA CAATGCAAAA GAGTTATTAG CTACGCTTCT TAAAGCCAAG
CCAGCATCTG CTAAGGGTAG TTATTTGAAA AGTATTAGCT TAGCTAGCAC AATGAGTAAA
GGAGTTGATG TAGATACAAG TACTAATTTT GGATTCTAA
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| Protein sequence | MAKLTRKQKA VAEQCDFQKS YKLEEAIELV QKITYTKFDA SIDIAVHLGV DPRKADQMVR
GTVVLPHGTG KNKRILVLCT PEKEKEAREA GADHVGLDDY IKKIEEGWVD IDVIITMPEI
MAKVGRLGKI LGPRGLMPNP KTGTVTVEIA KAVQAVKSGK IEYKVDKYGI VHASVGRVSF
SKEALRDNAK ELLATLLKAK PASAKGSYLK SISLASTMSK GVDVDTSTNF GF
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