Gene Aasi_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1356 
Symbol 
ID6377428 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand- 
Start bp1730073 
End bp1730744 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content37% 
IMG OID642682435 
Producthypothetical protein 
Protein accessionYP_001958390 
Protein GI189502673 
COG category[R] General function prediction only 
COG ID[COG2738] Predicted Zn-dependent protease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATTA TTAGTATTGT TATTTTCTTA CTGAGCTTGT TAATACACCA AATCTTAAAA 
TGGAAACTTG CTAGGTATGC TAGTATGCAA TTAAGATCTG GCTTGACCGG TGCTGAAATA 
GCTGCTAAAA TGTTGCAGTA TTATGGAATA AGGGATGTGA CGATTAGTTG TACACAAGGC 
CATTTAACAG ATCATTATAA TCCTGTTAAT AAAACAGTGA ATCTAAGCGA AACAGTATTT 
TATGCGAGTA ATGCAGGATC TGCCGCCGTA GCTGCTCATG AATGTGGACA TGCGGTTCAG 
CACGCCAAAG GCTACGCCTT TTTAAAATTT CGTTCTGCTA TGGTACCATT ATTGTCGTTT 
ACTTCACGAT ACATGATGTG GATTATTTTA ATAGGTATTT TTCTTGCTAG GACTACACTT 
CTACCTCTAG AGATTGGTAT CGGCTTGTTT GCTGTAACAA CGTTATTTAC TTTTATAACT 
CTGCCAGTAG AATTTGACGC AAGTAGAAGG GCGTTGGCTT GGATAAATCA GCAAAATATA 
GTAAGTAGCC AGGAATATAC TGCAGCTAAA AATGCATTGT GGTGGGCAGC AATGACCTAT 
GTAATGGCCG CTTTAGGTTC TTTAGCAGAA TTATTACATC TCCTATCTAT TTTAAATAGA 
AGAAGAGATT AA
 
Protein sequence
MRIISIVIFL LSLLIHQILK WKLARYASMQ LRSGLTGAEI AAKMLQYYGI RDVTISCTQG 
HLTDHYNPVN KTVNLSETVF YASNAGSAAV AAHECGHAVQ HAKGYAFLKF RSAMVPLLSF 
TSRYMMWIIL IGIFLARTTL LPLEIGIGLF AVTTLFTFIT LPVEFDASRR ALAWINQQNI 
VSSQEYTAAK NALWWAAMTY VMAALGSLAE LLHLLSILNR RRD