| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1309 |
|---|
| Symbol | |
|---|
| ID | 6377511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | + |
|---|
| Start bp | 1670657 |
|---|
| End bp | 1672570 |
|---|
| Gene Length | 1914 bp |
|---|
| Protein Length | 637 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642682394 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001958349 |
|---|
| Protein GI | 189502632 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0514] Superfamily II DNA helicase |
|---|
| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATG TTCATTACAT TTTAAAGAAG TATTGGGGAT ACAATAGATT TCGGTCTTTG
CAGCTCGAAA TCATACAAGC TACATTGTCT AAAAAAGATG TATTAGCGCT ATTACCTACA
GGAGGGGGCA AATCTATTTG CTTCCAAATA CCTGCACTAG CCAAACCAGG TATATGTCTT
GTCGTAACAC CACTTATTTC TTTGATGAAA GACCAAGTGG AACAGCTTAA GAAAAGAAAT
ATTTCAGCAG CAGCCATTTT CACAGGTATG TCTTATGCAG AAATAGACCT GATACTAGAT
AACTGCATCT ATGGGCATAC TAAATTCCTA TACATTTCGC CCGAGCGTCT TAAAACAGAA
CTTTTTATAA CACGTGTCCA AAAGATGCAC GTAAATCTAT TAGCTATAGA TGAAGCACAC
TGCATCTCTC AATGGGGGTA TGACTTTAGG CCTTCCTATT TAGAGATAGC CGAACTACGA
CCGTTACTAC CAAACGTAAA TATTATTGCA CTTACAGCAA CTGCCACTCG AGCTGTTAAA
CAAGATATTC AAGACAAGCT CGCCTTTAAA AATCCTGTTG TATTTCAAAA AAGTTTTAAC
CGTGATAACC TAGCATACCT TGTTAAAAGA ACAGATGACA AAGATGGTGC TTTATTAAGG
TTACTCAACC GTATAAAAGG AACAGCTATC ATTTATGTTA ACACCCGCAA AAAAACCAAG
CTGATTTCAC AATTTTTAGC TAAAAACAAT ATCAACACTA CTTTCTATCA TGGAGGATTA
GATAACACAG AAAGAACCCA AAGACAAGAC GCTTGGATAA AAGGAAAAGT TAGGGTAATG
GTGGCTACTA ATGCATTTGG CATGGGTATC GACAAGCCAG ATGTACGATT AGTAGTACAT
TTAGATCTAC CCACTACTTT AGAAGCTTAT TACCAAGAGG CAGGTAGAGC AGGGCGTGAC
GAACAAAAGT CCTATGCCAT TATATTATAT GATGAGCAGG ATATTTTGGA ATTAAAAGAA
AATATAGAAA AAGAACACCC TTCTATTGAG CAGCTTAAAA AGGTATACCA ACAATTAGCC
AACTACTATC AACTAGCAGT AGGCTCTCAT GATAATACTG CACATGATTT TGATTGGGAA
GACTTTGCGA ATACCTGTAG AATACAGCCT CAAGAAGCTT ACCAAGCTAT CAAAAAATTA
GAAAGCGAAG GACTTATTCG ACTCAATGAA GCCTTTTTTC AACCTGCTAA GCTGCATATA
GCTGTTAACC ACCACGATCT TTATGCGTTT CAGGTAGCTC ATGCCATCTA TGATGCCATT
ATGAAGTCTA TTTTAAGGCT GTACGGGGGA GAGCTTTTTT CCGAGTTCTG TACTATCTCA
GAGGCAAAAA TAGCTCAGCA TATGCAAACT AATCCGGCAA CAGTTACTCA GCAGCTTCAT
AAGCTTCACC AACTAGGCGT AGTCAATTAT GTTCCACAAA CCGATAAACC ACAGATAACA
TTTTTACAAC CTCGTTATGC AGCGGCTAAT ATACCATTAG ATACTAAGTC TTTACAACAC
AAAAGTAATT TAGCCAAGCA AAAAGCTGAT GCAGTCATTC ACTATATAAC CCATCAAAAT
CGCTGCAGAG CACAAATACT ATTAGAATAT TTTGATGAAA TTTTCTATGA GCCTTGTAAA
ATGTGTGATA TTTGCTTGAG TAAACCATCT CTTCAGCATA CTACTAATGA TTACTGCATA
GCAAGAAATC TTATTTTAAA ACATGTACAT ACAGATACAC CATACCACCT CCAAGAATTG
ATTAACAGCG TAGATTTGCC CGAGGAAACA GTAATAGCCA CCATTAGACA AATGTTAGAC
CATGGAGAGT TGGTATACGA CTTAGCTAAC AGAATCTTAA GAGCTAATGA CTAA
|
|---|
| Protein sequence | MEDVHYILKK YWGYNRFRSL QLEIIQATLS KKDVLALLPT GGGKSICFQI PALAKPGICL
VVTPLISLMK DQVEQLKKRN ISAAAIFTGM SYAEIDLILD NCIYGHTKFL YISPERLKTE
LFITRVQKMH VNLLAIDEAH CISQWGYDFR PSYLEIAELR PLLPNVNIIA LTATATRAVK
QDIQDKLAFK NPVVFQKSFN RDNLAYLVKR TDDKDGALLR LLNRIKGTAI IYVNTRKKTK
LISQFLAKNN INTTFYHGGL DNTERTQRQD AWIKGKVRVM VATNAFGMGI DKPDVRLVVH
LDLPTTLEAY YQEAGRAGRD EQKSYAIILY DEQDILELKE NIEKEHPSIE QLKKVYQQLA
NYYQLAVGSH DNTAHDFDWE DFANTCRIQP QEAYQAIKKL ESEGLIRLNE AFFQPAKLHI
AVNHHDLYAF QVAHAIYDAI MKSILRLYGG ELFSEFCTIS EAKIAQHMQT NPATVTQQLH
KLHQLGVVNY VPQTDKPQIT FLQPRYAAAN IPLDTKSLQH KSNLAKQKAD AVIHYITHQN
RCRAQILLEY FDEIFYEPCK MCDICLSKPS LQHTTNDYCI ARNLILKHVH TDTPYHLQEL
INSVDLPEET VIATIRQMLD HGELVYDLAN RILRAND
|
|---|
| |