| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1284 |
|---|
| Symbol | |
|---|
| ID | 6377425 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 1637598 |
|---|
| End bp | 1638599 |
|---|
| Gene Length | 1002 bp |
|---|
| Protein Length | 333 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 642682373 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001958328 |
|---|
| Protein GI | 189502611 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3547] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.159965 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAATTTA CTTATATTCT TGGAATCGAT ATATCAAAAG ATACTATTGA CCTAGCACTC
AGTCAAAATA AAGCTAATAC TAATATTGTT AACAGTAAGT TTAGTAACAA TTTAAAAGGG
TATAAAGCCT TATTAAAATG GTTCAAAAAC CAAGGAGTAA AAACAGAGCA ACTCCTTATC
TGTTTAGAAA ATACAGGTAT TTATCATCGG CCTCTGACAG CTTTTTTACT CAGTGAGCAA
GCTTTTGTTT GGGTAGAAAA TGCACTAGAG ATTAAATGGA GTATGGGTTT ACAAAGAGGT
AAAAATGACC AGATAGATGC ACAAAGAATA TGCTTATATG CCTTTAGAAA TCAAGATAAA
GCCCAAGCCT ACTCACCCAA AGATAACTCT TTACAAGATT TAGCCGATTT ATTGGCTACT
AGAGAACGCT TAGTAGAAGT AAGGAAAATG CTATTAGTCC CTATTAAAGA GCTAAAACAA
GTTGGCTTAG AAGCAGAGTC AAAAAATGTA GAAAAAAGTT GTAAGAAAAC ATTGTCTGGA
ATAGATAAAG ACATAGAAGC TATAGAAAAA GGGCTAGAAA ATATAATTGC TCAACACAAA
GAGATAGATG ATAATTACTG GTCGGTATGT TCAGTACCAA ATGTAGGTAA AATTACAGCA
TTGTACCTGT TAGTAGCCAC CAATAACTTT AAACGATTTG ATGATGCTAA ACAGTTAGCA
AGTTATTGTG GGATAGCCCC TTTTGAATAC CGATCAGGGA CAAGTGTCAG AGGAAAAACA
AAAGTAAATC ATATGGCTAA TAAAAAGTTA AAAAAGGCTT TACATCTGTG TGCTGTAAGC
TCACTGAGGC ATAGATCAGA AATGAGTCTA TATTATAAGC ACAAAACAGA GGAAGGAAAA
AATAAGATGA GCGTTATCAA CGCAATACGT AATAAATTAC TTCAAAGGAT ATTTGCTTGT
GTTAGAGAAA AACGGATGTA CATCGTTAAG CAAGCGTCTT AA
|
|---|
| Protein sequence | MQFTYILGID ISKDTIDLAL SQNKANTNIV NSKFSNNLKG YKALLKWFKN QGVKTEQLLI
CLENTGIYHR PLTAFLLSEQ AFVWVENALE IKWSMGLQRG KNDQIDAQRI CLYAFRNQDK
AQAYSPKDNS LQDLADLLAT RERLVEVRKM LLVPIKELKQ VGLEAESKNV EKSCKKTLSG
IDKDIEAIEK GLENIIAQHK EIDDNYWSVC SVPNVGKITA LYLLVATNNF KRFDDAKQLA
SYCGIAPFEY RSGTSVRGKT KVNHMANKKL KKALHLCAVS SLRHRSEMSL YYKHKTEEGK
NKMSVINAIR NKLLQRIFAC VREKRMYIVK QAS
|
|---|
| |