Gene Aasi_1282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1282 
Symbol 
ID6377393 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1635637 
End bp1636335 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content36% 
IMG OID642682372 
Producthypothetical protein 
Protein accessionYP_001958327 
Protein GI189502610 
COG category[L] Replication, recombination and repair 
COG ID[COG1662] Transposase and inactivated derivatives, IS1 family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.147324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATGTA AAGGATGTAA ATCGAATAAA ACCATCAATA ATGGTAAAGT ACGAGGCAAG 
CAAAGATACA ACTGCAAAAG CTGTGGGTTT AACTTTGTTG AAGTAGATGA GCGTAGGGGA
AAGAATATAG ATAAACAAAG AATGGCTATC CACTTATATT TAGAGAACAT GGGTTTTAGA
GCTATTGGCA GGGTATTGGG AGTGAGTAAT CTAGCAGTTT TGAAATGGAT AAGGGCAGCT
GGAGAATGGA TACAAGCTTA CCATAATCAA AACAAGCCTA AAAGAAGGCA AGCAGTGGAA
GTAATAGAAA TGGATGAAAT GTGGCATTAT GTAGGATCAA AAAAAAAGAA ACTATGGATA
TGGTTTGCAT TGGAGCGATC AGGGGGAAGT ATACTTGACT TTGTCACGGG CAGCCGAGAA
GCAAGCACAG GAAAAAGGCT TTGGATTAAA ATAAAAGATA TAGCTTGCCG ATCATTTTAT
GCGACGGACC ATTGGCCAGC GTATACACAG TTTATAAATG CTCATAAGCA TAAGGTATCC
AAAAAGCAGA CAACACATAT AGAATCACAT AATGCTAATG TTAGGCATTA TTTAGCAAGG
TTTCGTAGAA AAACCAAGTG TTATTCAAAA TCAGAAAGGC TGGTAGAGTT ATCTTTATAC
TTATTGATAT ATAAAGATTT TATCTTGTCT ATATTTTAG
 
Protein sequence
MECKGCKSNK TINNGKVRGK QRYNCKSCGF NFVEVDERRG KNIDKQRMAI HLYLENMGFR 
AIGRVLGVSN LAVLKWIRAA GEWIQAYHNQ NKPKRRQAVE VIEMDEMWHY VGSKKKKLWI
WFALERSGGS ILDFVTGSRE ASTGKRLWIK IKDIACRSFY ATDHWPAYTQ FINAHKHKVS
KKQTTHIESH NANVRHYLAR FRRKTKCYSK SERLVELSLY LLIYKDFILS IF