Gene Aasi_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1260 
Symbol 
ID6376743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1616692 
End bp1618440 
Gene Length1749 bp 
Protein Length582 aa 
Translation table11 
GC content33% 
IMG OID642682356 
Producthypothetical protein 
Protein accessionYP_001958311 
Protein GI189502594 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.678722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTT CTTCATTTAT CATTAAAGCT GCTTATCCAT ACAGAATCTA TATATTAGGT 
AACCTTTTAG TAATAATAAT AGCGGCGATA GATGCTAATT TAAGGCCCTA TGTAATTAAA
TTATTAATAG ATTCTGTAGC CAGCTCCAAT ATCCGAGGTA TCATTGATAT AGGTGTTATC
TATGCATTGT TACAGTTAAT AATAGTTGCC TTATGGTCAT TCAGTGATTG GTGTCTTATC
AAATACATTC CACCATTCAG AGCCTTTATT ATTCTACTTT TAACAGAACG TATTAACAAC
TTTTCATATA GCTTTTTTCA AAATAATCTT ACAGGCAGCA TAACAGCAAA GATGAATGAT
GTTGCAAACT TGGTACCTAC TATTGTATCT ACCATCATGT ATCAGTTTAT ACTCTTTGCG
CTAAGTATGA TTGTTAGCCT TATTTTATTG GCCAGGATAC ATCTAATATT GGGGCTTGGG
GTGGTAGCCT GGAGCTTTCT TTTTTTATGG AGGACTTATA ATAGCCTTCA AAAAGCAAAC
CATCTTACTG CTAACTATGC AGAATCAAGA GCAAGAATAT CGGGCTATAT CTCAGATTTT
ATAACAAATA TTTTAAATGT GAGATGTTTT GCTCATGAGG ACTATGAAAA AAATAAACTA
CATACCATTA CCTCAGATTT TGTAGATAAG GCAAAAAAAC AGGGTAATTT CTTTATGAGA
TTTTACGCTA TACAAGGAGG GCTTGTTTCA ATTTATACAA TAGCCTTTTT GGCAGGGCTT
ATTTATTTGC GTTTTATCAA TTTTATCACT CCTGGCGATA TTGCATTAGT ATTTATATTA
AATTTTAGAA TAGTGGATAA GCTTTATGAA TTATCAAATC ATTTGCGTGA TTTTGCTACT
AATTGGGGGG TAGTGAAACA AGCGCTAAAG TTCTTTGACC AGCCTATCGA AATTAAGGAT
ACAGTTAGGC CAGAGCAAAT AACAATAAAG CAAGGGAAAA TAGAGTTTAA AAAAGTTTAT
TTCCATTACA AAGATGGAGG GAGCTTATTT AAAAATCTAA ATTTGACTAT TAATGCAGGA
CAAAAGGTTG GGTTAGTAGG TTACTCCGGA AGTGGAAAAT CTACATTAAT AAGCTTGATC
TTGCGGCTTT ATGAAGTTAT TTCTGGCTGT ATTAAGGTGG ATGATTATGA TATACAAAAT
TTTACACAAA CCTCCCTTCG TTCTCAAATT AGTTTTATCC CTCAATCTCC TACAATGTTT
TACCGAACAA TAAAAGAAAA TATAAGTTAT GGTAAATTAG ATGCTACGGA TGAAGAAATA
ATAGATGCTG CTAAAAAAGC TTATGCACAT GAATTTATAC TGCAACTACC TGAAAAATAT
AATTCTTTGG TAGGTGAAAG AGGAATAAAA TTATCTGGAG GACAGCTTCA AAGAATTGCT
ATTGCACGCG TTATACTTAA AAACGCTAAA ATCCTAATTT TAGATGAATC AACATCCCAG
CTAGACTCTA TTACAGAATA TAAGATACAA AACTCTTTAA AAGATCTAAT GCAAGGCAGG
ACAACTATAG CGATTGCCCA TCGACTATCT ACACTTTCCT ATATGGACCG AATTTTAGTC
TTTGACCAAG GCCGTATTAT ACAAGATGGG ACACATTATG AGTTAATTAA GCAAGAAGGG
TTATATAAAA TGCTCTGGAA AAAACAAATA AACGGATTTA TACCACAAAA TAAGCAGGAG
ATTTTGTAG
 
Protein sequence
MNISSFIIKA AYPYRIYILG NLLVIIIAAI DANLRPYVIK LLIDSVASSN IRGIIDIGVI 
YALLQLIIVA LWSFSDWCLI KYIPPFRAFI ILLLTERINN FSYSFFQNNL TGSITAKMND
VANLVPTIVS TIMYQFILFA LSMIVSLILL ARIHLILGLG VVAWSFLFLW RTYNSLQKAN
HLTANYAESR ARISGYISDF ITNILNVRCF AHEDYEKNKL HTITSDFVDK AKKQGNFFMR
FYAIQGGLVS IYTIAFLAGL IYLRFINFIT PGDIALVFIL NFRIVDKLYE LSNHLRDFAT
NWGVVKQALK FFDQPIEIKD TVRPEQITIK QGKIEFKKVY FHYKDGGSLF KNLNLTINAG
QKVGLVGYSG SGKSTLISLI LRLYEVISGC IKVDDYDIQN FTQTSLRSQI SFIPQSPTMF
YRTIKENISY GKLDATDEEI IDAAKKAYAH EFILQLPEKY NSLVGERGIK LSGGQLQRIA
IARVILKNAK ILILDESTSQ LDSITEYKIQ NSLKDLMQGR TTIAIAHRLS TLSYMDRILV
FDQGRIIQDG THYELIKQEG LYKMLWKKQI NGFIPQNKQE IL