Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_1260 |
Symbol | |
ID | 6376743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | - |
Start bp | 1616692 |
End bp | 1618440 |
Gene Length | 1749 bp |
Protein Length | 582 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642682356 |
Product | hypothetical protein |
Protein accession | YP_001958311 |
Protein GI | 189502594 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.678722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTT CTTCATTTAT CATTAAAGCT GCTTATCCAT ACAGAATCTA TATATTAGGT AACCTTTTAG TAATAATAAT AGCGGCGATA GATGCTAATT TAAGGCCCTA TGTAATTAAA TTATTAATAG ATTCTGTAGC CAGCTCCAAT ATCCGAGGTA TCATTGATAT AGGTGTTATC TATGCATTGT TACAGTTAAT AATAGTTGCC TTATGGTCAT TCAGTGATTG GTGTCTTATC AAATACATTC CACCATTCAG AGCCTTTATT ATTCTACTTT TAACAGAACG TATTAACAAC TTTTCATATA GCTTTTTTCA AAATAATCTT ACAGGCAGCA TAACAGCAAA GATGAATGAT GTTGCAAACT TGGTACCTAC TATTGTATCT ACCATCATGT ATCAGTTTAT ACTCTTTGCG CTAAGTATGA TTGTTAGCCT TATTTTATTG GCCAGGATAC ATCTAATATT GGGGCTTGGG GTGGTAGCCT GGAGCTTTCT TTTTTTATGG AGGACTTATA ATAGCCTTCA AAAAGCAAAC CATCTTACTG CTAACTATGC AGAATCAAGA GCAAGAATAT CGGGCTATAT CTCAGATTTT ATAACAAATA TTTTAAATGT GAGATGTTTT GCTCATGAGG ACTATGAAAA AAATAAACTA CATACCATTA CCTCAGATTT TGTAGATAAG GCAAAAAAAC AGGGTAATTT CTTTATGAGA TTTTACGCTA TACAAGGAGG GCTTGTTTCA ATTTATACAA TAGCCTTTTT GGCAGGGCTT ATTTATTTGC GTTTTATCAA TTTTATCACT CCTGGCGATA TTGCATTAGT ATTTATATTA AATTTTAGAA TAGTGGATAA GCTTTATGAA TTATCAAATC ATTTGCGTGA TTTTGCTACT AATTGGGGGG TAGTGAAACA AGCGCTAAAG TTCTTTGACC AGCCTATCGA AATTAAGGAT ACAGTTAGGC CAGAGCAAAT AACAATAAAG CAAGGGAAAA TAGAGTTTAA AAAAGTTTAT TTCCATTACA AAGATGGAGG GAGCTTATTT AAAAATCTAA ATTTGACTAT TAATGCAGGA CAAAAGGTTG GGTTAGTAGG TTACTCCGGA AGTGGAAAAT CTACATTAAT AAGCTTGATC TTGCGGCTTT ATGAAGTTAT TTCTGGCTGT ATTAAGGTGG ATGATTATGA TATACAAAAT TTTACACAAA CCTCCCTTCG TTCTCAAATT AGTTTTATCC CTCAATCTCC TACAATGTTT TACCGAACAA TAAAAGAAAA TATAAGTTAT GGTAAATTAG ATGCTACGGA TGAAGAAATA ATAGATGCTG CTAAAAAAGC TTATGCACAT GAATTTATAC TGCAACTACC TGAAAAATAT AATTCTTTGG TAGGTGAAAG AGGAATAAAA TTATCTGGAG GACAGCTTCA AAGAATTGCT ATTGCACGCG TTATACTTAA AAACGCTAAA ATCCTAATTT TAGATGAATC AACATCCCAG CTAGACTCTA TTACAGAATA TAAGATACAA AACTCTTTAA AAGATCTAAT GCAAGGCAGG ACAACTATAG CGATTGCCCA TCGACTATCT ACACTTTCCT ATATGGACCG AATTTTAGTC TTTGACCAAG GCCGTATTAT ACAAGATGGG ACACATTATG AGTTAATTAA GCAAGAAGGG TTATATAAAA TGCTCTGGAA AAAACAAATA AACGGATTTA TACCACAAAA TAAGCAGGAG ATTTTGTAG
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Protein sequence | MNISSFIIKA AYPYRIYILG NLLVIIIAAI DANLRPYVIK LLIDSVASSN IRGIIDIGVI YALLQLIIVA LWSFSDWCLI KYIPPFRAFI ILLLTERINN FSYSFFQNNL TGSITAKMND VANLVPTIVS TIMYQFILFA LSMIVSLILL ARIHLILGLG VVAWSFLFLW RTYNSLQKAN HLTANYAESR ARISGYISDF ITNILNVRCF AHEDYEKNKL HTITSDFVDK AKKQGNFFMR FYAIQGGLVS IYTIAFLAGL IYLRFINFIT PGDIALVFIL NFRIVDKLYE LSNHLRDFAT NWGVVKQALK FFDQPIEIKD TVRPEQITIK QGKIEFKKVY FHYKDGGSLF KNLNLTINAG QKVGLVGYSG SGKSTLISLI LRLYEVISGC IKVDDYDIQN FTQTSLRSQI SFIPQSPTMF YRTIKENISY GKLDATDEEI IDAAKKAYAH EFILQLPEKY NSLVGERGIK LSGGQLQRIA IARVILKNAK ILILDESTSQ LDSITEYKIQ NSLKDLMQGR TTIAIAHRLS TLSYMDRILV FDQGRIIQDG THYELIKQEG LYKMLWKKQI NGFIPQNKQE IL
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