| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1242 |
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| Symbol | lysS |
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| ID | 6377631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | + |
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| Start bp | 1587945 |
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| End bp | 1589453 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642682338 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_001958294 |
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| Protein GI | 189502577 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCATATT CTATAAGCGA ACAAGAACTT CTAAGAAGGC AAAAGAAAGA AGAATTAGAA
GCTTTAGGTA TTAATCCATA CCCCTCAGCA ACTTTTGCAA GCAATACCTC TACCCAAGAC
ATTTTATCTA ATTTCAATAA AGCACCCGAT AATTTTAAAC AGATAAGTAT TGCAGGACGT
ATTATGGGTA GACGCATCAT GGGGGCTGCC TCTTTTGTAG AGCTACAAGA TGCTAGTGGA
AAAATACAGC TTTATGTGCA CCGAGATACG TTATGTCCAG GCGATGATAA AAGCTTTTAC
AATACAGTTT TCAAAAAGTT GCTAGATATT GGTGACCTAA TAGGTATAGA GGGATATGTA
TTTACTACCC AAGTAGGCGA GATTAGTATT CATGTTAATA AGCTTACGCT ATTATCCAAA
GCTCTTCGCC CACTACCTGT TGTTAAAGAG GATGATAAAC AGGTCTATGA TGCCTTTACA
GACCCAGAAC AAAGGTATAG ACAACGGTAT GTAGATTTAC TGGTAACTCC TACCACAAGG
TCCATATTTC AAAAAAGGAC TCAAATGATA CAAGCCATTC GTCAGTACTT AAACAGCCAA
GGATATGATG AGGTAGAAAC ACCTATTTTG CAACCGCTCT ACGGAGGAGC ATCTGCTAGA
CCTTTTAAAA CACACCACAA TACGCTAGAT ATGTCGCTTT ATCTTCGTAT TGCCAACGAG
CTATACTTAA AAAGGCTAAT TGTAGGTGGT TATGAGGGCG TATATGAATT TGCAAAAGAT
TTCAGAAATG AGGGTATGTC GCGTTTTCAT AACCCAGAAT TTACCATGCT GGAATTGTAT
GTGGCCTATA AGGACTACAA ATGGATGATG AATCTTACTG AAGAATTACT AGAACAGGTA
GCACTGCATT TATATGGAAC TACAGCAGTA CCAGTAGGAA CTCATACCAT TGATTTTAAA
AGGCCCTGGA AAAGGTTTAC CATGTTTGAA GCAATACAGC ATTTTACAGG CATAGACATT
AGTCAGATGG AGGAACTTGA ACTCAGAAAA GCTGCAGCAA CGTTATCGGT ACCATTAGAA
GCATCAGCAG GAAAAGCAAA AATTATTGAT GAAATTTTTG GAGCCAAATG TGAACCTAAC
CTAATTCAAC CTACTTTTAT CACGGACTAT CCAGTAGAAA TGTCGCCACT GGCTAAGCAG
CATAGAGACA ACCCTACTTT GGTAGAACGG TTTGAAGTCA TCTGTAATGG AAAAGAAATC
TGTAATGCTT TTTCTGAGTT AAATGACCCT ATCGAGCAAC GTAAACGCTT TGAAGAACAA
CTTCAATTGG GGCAACGTGG AGATGAAGAA GCTATGATGC TAGACGAAGA TTTCTTAAGA
GCATTAAGTT ATGGTATGCC ACCAACAGCT GGCTTAGGCA TCGGTATTGA TAGACTCGCC
ATGATTATGA CGAATGCACC TTCTATACAA GAAGTTATTT TCTTCCCACA AATGCGACCA
GAACATTAA
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| Protein sequence | MSYSISEQEL LRRQKKEELE ALGINPYPSA TFASNTSTQD ILSNFNKAPD NFKQISIAGR
IMGRRIMGAA SFVELQDASG KIQLYVHRDT LCPGDDKSFY NTVFKKLLDI GDLIGIEGYV
FTTQVGEISI HVNKLTLLSK ALRPLPVVKE DDKQVYDAFT DPEQRYRQRY VDLLVTPTTR
SIFQKRTQMI QAIRQYLNSQ GYDEVETPIL QPLYGGASAR PFKTHHNTLD MSLYLRIANE
LYLKRLIVGG YEGVYEFAKD FRNEGMSRFH NPEFTMLELY VAYKDYKWMM NLTEELLEQV
ALHLYGTTAV PVGTHTIDFK RPWKRFTMFE AIQHFTGIDI SQMEELELRK AAATLSVPLE
ASAGKAKIID EIFGAKCEPN LIQPTFITDY PVEMSPLAKQ HRDNPTLVER FEVICNGKEI
CNAFSELNDP IEQRKRFEEQ LQLGQRGDEE AMMLDEDFLR ALSYGMPPTA GLGIGIDRLA
MIMTNAPSIQ EVIFFPQMRP EH
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