Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_1239 |
Symbol | |
ID | 6376675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | - |
Start bp | 1585973 |
End bp | 1586872 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642682335 |
Product | hypothetical protein |
Protein accession | YP_001958291 |
Protein GI | 189502574 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.968724 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATGGG AGCTAGCCAT CCAGCAATTT GAGATACACT TACAGCTTGA GCGGTCTCTT GCTGAAAATT CTATTTTGGC TTATGGTAGT GATCTACGTA AGCTATGCCA ATTTATAGAA TTAAGGCAAC TTGGCCTATC TCCTTTGACA TTGCAGACTA CACACTTACG TGATTTCTTA ATGTATCTCT ATGAATTAGG CATAGGGGCC ACTAGTCAAG CGCGTATTTT GTCTGCTATT CGGGGTTTTT ATCAATTTCT ACTGTTAGAA GGGTATTTAG AGACAGATCC TACTAAGCTT GTGGAACGTC CTGTACTAGG GCGCAAACTT CCCCATACGT TGTCTGTACA TGAAATAGAA ATATTATTTG GTACCATTGA CCATAGCACT GCTATGGGTA TGCGCAATAG GGCTATGCTA GAAACATTGT ATAGTTCTGG GCTTCGTGTA TCTGAGCTGA TTTCTTTACG GATGAGTGAT ATCTATTTTG AAGAAATGTT TTTACAAGTA CTAGGGAAAG GCAATAAGCA ACGATTAGTT CCAATAGGTA AAATAGCATT GAAGTATTTA CGTATATATA TAGAAGAAGT ACGTATTCAT TTTCCAATTA AAAAAGAGGC CGCTAATTGT GTGTTCTTAA ATAAGCGGGG AAGTAAAATG AGTAGGGTAA TGGTATTTTT AATTATTAAG GAATTGGCCA GTAAAGCTGG CTTACAACAG GAAATTAGTC CACATACGTT TAGGCATTCT TTTGCAACCC ATCTAGTAGA GGGAGGTGCG GATTTAAGGG CTGTACAGGC TATGCTAGGC CATGAGTCTA TTACTACTAC GGAAATATAT ACTCACTTAG ATCGAAGTTA TTTACAGCAA ACTATTCATG AATTTCATCC ACGTAGTTGA
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Protein sequence | MTWELAIQQF EIHLQLERSL AENSILAYGS DLRKLCQFIE LRQLGLSPLT LQTTHLRDFL MYLYELGIGA TSQARILSAI RGFYQFLLLE GYLETDPTKL VERPVLGRKL PHTLSVHEIE ILFGTIDHST AMGMRNRAML ETLYSSGLRV SELISLRMSD IYFEEMFLQV LGKGNKQRLV PIGKIALKYL RIYIEEVRIH FPIKKEAANC VFLNKRGSKM SRVMVFLIIK ELASKAGLQQ EISPHTFRHS FATHLVEGGA DLRAVQAMLG HESITTTEIY THLDRSYLQQ TIHEFHPRS
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