Gene Aasi_1239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1239 
Symbol 
ID6376675 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1585973 
End bp1586872 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content38% 
IMG OID642682335 
Producthypothetical protein 
Protein accessionYP_001958291 
Protein GI189502574 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID[TIGR02225] tyrosine recombinase XerD 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.968724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATGGG AGCTAGCCAT CCAGCAATTT GAGATACACT TACAGCTTGA GCGGTCTCTT 
GCTGAAAATT CTATTTTGGC TTATGGTAGT GATCTACGTA AGCTATGCCA ATTTATAGAA
TTAAGGCAAC TTGGCCTATC TCCTTTGACA TTGCAGACTA CACACTTACG TGATTTCTTA
ATGTATCTCT ATGAATTAGG CATAGGGGCC ACTAGTCAAG CGCGTATTTT GTCTGCTATT
CGGGGTTTTT ATCAATTTCT ACTGTTAGAA GGGTATTTAG AGACAGATCC TACTAAGCTT
GTGGAACGTC CTGTACTAGG GCGCAAACTT CCCCATACGT TGTCTGTACA TGAAATAGAA
ATATTATTTG GTACCATTGA CCATAGCACT GCTATGGGTA TGCGCAATAG GGCTATGCTA
GAAACATTGT ATAGTTCTGG GCTTCGTGTA TCTGAGCTGA TTTCTTTACG GATGAGTGAT
ATCTATTTTG AAGAAATGTT TTTACAAGTA CTAGGGAAAG GCAATAAGCA ACGATTAGTT
CCAATAGGTA AAATAGCATT GAAGTATTTA CGTATATATA TAGAAGAAGT ACGTATTCAT
TTTCCAATTA AAAAAGAGGC CGCTAATTGT GTGTTCTTAA ATAAGCGGGG AAGTAAAATG
AGTAGGGTAA TGGTATTTTT AATTATTAAG GAATTGGCCA GTAAAGCTGG CTTACAACAG
GAAATTAGTC CACATACGTT TAGGCATTCT TTTGCAACCC ATCTAGTAGA GGGAGGTGCG
GATTTAAGGG CTGTACAGGC TATGCTAGGC CATGAGTCTA TTACTACTAC GGAAATATAT
ACTCACTTAG ATCGAAGTTA TTTACAGCAA ACTATTCATG AATTTCATCC ACGTAGTTGA
 
Protein sequence
MTWELAIQQF EIHLQLERSL AENSILAYGS DLRKLCQFIE LRQLGLSPLT LQTTHLRDFL 
MYLYELGIGA TSQARILSAI RGFYQFLLLE GYLETDPTKL VERPVLGRKL PHTLSVHEIE
ILFGTIDHST AMGMRNRAML ETLYSSGLRV SELISLRMSD IYFEEMFLQV LGKGNKQRLV
PIGKIALKYL RIYIEEVRIH FPIKKEAANC VFLNKRGSKM SRVMVFLIIK ELASKAGLQQ
EISPHTFRHS FATHLVEGGA DLRAVQAMLG HESITTTEIY THLDRSYLQQ TIHEFHPRS