Gene Aasi_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1236 
Symbol 
ID6377402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand- 
Start bp1581872 
End bp1582531 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content30% 
IMG OID642682332 
Producthypothetical protein 
Protein accessionYP_001958289 
Protein GI189502572 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0976506 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCACA TAAATGTAAA AAAGTGGAAT TCATACAGTG TGTATTTACT TATCCCCAAT 
ATAGTTGGCT ATATTAGAAC ATTATTATCC GTTTTAGCCT TTTATGTGTG TTTCAGTAAG 
CCATATTGGT TTATAACCTT ATATGGTATT AGTCAATTAT TAGATAGCTT AGACGGATAT 
ATTGCCCGTC GCCTAAACCA AGCAAGTGCT TATGGGGCTA TGCTTGATAT GATGATTGAC 
AGATCTTCTA CGACAGCGTT ATTAATTATT TTATCTAATT TTTATCCTGC TTACATACAA 
TACTTCATTG TTATAATACT CTTAGATGTT ATATCTCATT TTACGTATAT CTATAGTTCA 
CTTTCTTATG GTAAAAAGTC ACATAAGTCT ATTGCTAAAA ATCAGTTCTC GATTTTAAGA 
ATATATTATG GTTACAAGCC TATGTTATTT TTATTATGTT TAGGTAGCGA GATATATCTG 
CTATGGTTAT ATATGCGTCG TTTTAAAATA CAGTTAGCAC TTGATCCTTA TCTTGAAAGT 
TGTGCATATC CTATATTTAC TTATTTATTT GGAAGCTTAT TTGTAGTGAA GCAAATAATC 
AATATTGTAC AATTCCTACA AGCTGTTAAA GATATGGTTA GGTTAGATGT AAACAAATAA
 
Protein sequence
MEHINVKKWN SYSVYLLIPN IVGYIRTLLS VLAFYVCFSK PYWFITLYGI SQLLDSLDGY 
IARRLNQASA YGAMLDMMID RSSTTALLII LSNFYPAYIQ YFIVIILLDV ISHFTYIYSS 
LSYGKKSHKS IAKNQFSILR IYYGYKPMLF LLCLGSEIYL LWLYMRRFKI QLALDPYLES 
CAYPIFTYLF GSLFVVKQII NIVQFLQAVK DMVRLDVNK