| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1231 |
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| Symbol | |
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| ID | 6377261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | - |
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| Start bp | 1574963 |
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| End bp | 1576264 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 34% |
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| IMG OID | 642682327 |
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| Product | hypothetical protein |
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| Protein accession | YP_001958285 |
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| Protein GI | 189502568 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0464953 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGAAAATA ACTTTAAATC ACTTCAAACT ATCTATACCT ATTATTTAAA ACATCCGCAA
GTTTCTTTTG ATTCTAGGAA AGATGTAGCG AATACAATTT TCTTTGCTTT AAAAGGGGCA
TGTTGTGATG GTAATATTTT TGCTAGCCAA GCTTTAGCTA AGGGTGCAGC TTATGCAGTA
ATTGATAACC CACGTTATTA TCAAGAAGAT GAACGTTATC TTTTAGTTAA TGATACGCTT
GAGACATTAC AGCAGCTTGC AAAACTTCAT AGGAGCCAAC TTAATATCCC TATTATAGCT
ATTACAGGTT CTAATGGAAA AACAACCACT AAAGAATTGA TATATGCTGT ACTAAGCCAG
CGGTATAACT GTTATGCTAC TTCTGGTAAT TTCAATAATC ATATAGGCGT ACCTATTAGC
TTATTATCAA TAAAGAAGTC AACAGAAATG GCTGTTATAG AAATGGGTGC CAATCATATA
GGAGAAATAG CTCAGCTTTG TGAGATTGTT CAACCTACCC ATGGGCTAAT CACCAATATC
AGCCATGCAC ATTTGGAAGG GTTTGGTGGT ATTAATGGTG TTATTAAAGG TAAAAGTGAG
TTATATACTT ATTTAAAGCA GCATGGTGGT GTTCCTTTTA TTAATTCTGC AGATTCCGTA
CTTTTAAATG TGGCTAACGG ATTTGTAAAC CCTATTTACT ATCCACAAAA AGGGGACTAT
TATTATTGTG AATTAAAAGA AGCTAATCCT TATCTGGTCT ATACAAGCGA ACAGAGTACA
ACAGTGACTA CTCAACTAAT AGGCAAGCAT CATTTCCATA ATGTGGCTGC TGCATTGTGC
ATAGGGAAGT ATTTTGGCAT AGAACCAAAC ATGGTTAATA CAGCTATTCA AGCTTATAAT
CCTTCTAATA ACCGTACACA GCTTATTAAA AAAGGGACTA ATTCAATTCT ACTAGATGCC
TATAATGCAA ATCCTGCTTC TGTACAAGCT GCACTTGAAA GTTTTTCTTT CCTGAAGTCT
ATGTATAAAG TACTTATTTT AGCAGATATG AATGAATTAG GCGAAGAAAG TTTAGCTTTT
CATCAAGCAA TCATAGAAAA AACTGCTCAG CAGGATTATG ATGCAATTCT TTTACACGGG
CCTGTTATGG AAAAAGCTTG CTTGTATAAC CCTAAAGCAA TTTATTTTAA ACAAATATCT
AATCTCCAAG AATATCTTAG CAACCATAAG TTTTCCAATA CAGCTTTCTT GCTGAAGGGC
TCTCGTAGCT ATCATCTTGA AAGCCTATTG AATTTTATTT AA
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| Protein sequence | MENNFKSLQT IYTYYLKHPQ VSFDSRKDVA NTIFFALKGA CCDGNIFASQ ALAKGAAYAV
IDNPRYYQED ERYLLVNDTL ETLQQLAKLH RSQLNIPIIA ITGSNGKTTT KELIYAVLSQ
RYNCYATSGN FNNHIGVPIS LLSIKKSTEM AVIEMGANHI GEIAQLCEIV QPTHGLITNI
SHAHLEGFGG INGVIKGKSE LYTYLKQHGG VPFINSADSV LLNVANGFVN PIYYPQKGDY
YYCELKEANP YLVYTSEQST TVTTQLIGKH HFHNVAAALC IGKYFGIEPN MVNTAIQAYN
PSNNRTQLIK KGTNSILLDA YNANPASVQA ALESFSFLKS MYKVLILADM NELGEESLAF
HQAIIEKTAQ QDYDAILLHG PVMEKACLYN PKAIYFKQIS NLQEYLSNHK FSNTAFLLKG
SRSYHLESLL NFI
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