| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1211 |
|---|
| Symbol | |
|---|
| ID | 6377254 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 1545696 |
|---|
| End bp | 1546904 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642682310 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001958268 |
|---|
| Protein GI | 189502551 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1373] Predicted ATPase (AAA+ superfamily) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0000035841 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGAA TTTATCAGCC AGTTATTCAA GAGCATATAC AATCTTATAG CCAAATGCTA
TTCCTAGCTG GACCAAGGCA AGTAGGAAAA ACCACACTTC TATGGTCTAG TAAAAACGCT
AACAGCAATT TTAACTACTA CAATTGGGAT AATATAGATG ATCGCGAAAT ATTACTTAAA
GGTTATTCGC ATCTTACAGC TGGTGCTAAC CTAGACGTAG CATCATACCA AAAGCCTATC
CTAGCCTTAG ATGAAATTCA TAAGTATAAG CATTGGAAGA CCTTTTTAAA AGGCTTATAT
GACGGATATA AAAATGATCT TACCATTGTA GTAAGTGGAA GCGCGAAGTT AGATATCTAT
CGTCAAGGTG GCGATAGTCT TATGGGGCGT TATTTTTTGT ACCGTATTCA TCCTATAAGC
TTGGGAGAGC TTGTACGTAC AAAGCCTACT GCTGATCTAT TAGCTAAGCC TACCTATATA
TCTGAAGAGC AAGTAAAAAA CTTATTTGAA CTAGGGGGAT TTCCAGAACC CTTTCTAGCC
CAGAATATGA GCTTTTATAA CCGCTGGCAG GCTCTTAGAG AACGACAAAT GATCTTTGAG
GATATACGTG CCTTGTCACA TATTCATGAC CTAGCGCAGT TACAAGTGCT TGCTAAGCTC
TTAAAACATC AAGTAGGTAA TACAGTTAAA TATAGTGAAT TAGCTAAAAA GGTTAGGGTT
TCACAACCTA CGATTCAAGC TTGGTTAGAA GTATTATCCC ATTTTTATTA CTGTTTTATG
ATTCGCCCTT GGACACAAAA TGTATCTCGC TCTTTACTTA AAGAACCTAA AGTGTATCTG
TGGGATTGGT CTTGTATACC AGATCATGGA GCCCGGGTAG AAAATTTTGT GGCTTCTCAT
TTGCTAAAAA GTATTCATTA CTGGACTGAT ACAGGCAAAG GAAGATATGA ACTATACTTC
TTACGTACTA AAGACCAAAA AGAGATAGAC TTTATAGTAA CTCAAAACGA TAAGCCTTGG
TTAGTTATAG AAGTTAAGTC TTCTAAAAAT GCAGGCTTAA ATCCTCACTT AATTGAATTT
AAAGAAGCTT TAGGTGCACC TCATGCTTTT CAGTTAGCCT TTGATATGCC TTATATGGAA
ATTGATGCTT TAAGTTTAAC TAGGCCACAA ATTATACCAA TGGTTTCTTT TATTTCTCAA
TTAATTTAA
|
|---|
| Protein sequence | MERIYQPVIQ EHIQSYSQML FLAGPRQVGK TTLLWSSKNA NSNFNYYNWD NIDDREILLK
GYSHLTAGAN LDVASYQKPI LALDEIHKYK HWKTFLKGLY DGYKNDLTIV VSGSAKLDIY
RQGGDSLMGR YFLYRIHPIS LGELVRTKPT ADLLAKPTYI SEEQVKNLFE LGGFPEPFLA
QNMSFYNRWQ ALRERQMIFE DIRALSHIHD LAQLQVLAKL LKHQVGNTVK YSELAKKVRV
SQPTIQAWLE VLSHFYYCFM IRPWTQNVSR SLLKEPKVYL WDWSCIPDHG ARVENFVASH
LLKSIHYWTD TGKGRYELYF LRTKDQKEID FIVTQNDKPW LVIEVKSSKN AGLNPHLIEF
KEALGAPHAF QLAFDMPYME IDALSLTRPQ IIPMVSFISQ LI
|
|---|
| |