| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1207 |
|---|
| Symbol | |
|---|
| ID | 6376740 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 1541564 |
|---|
| End bp | 1542820 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 642682306 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001958264 |
|---|
| Protein GI | 189502547 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0000145703 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAAA TTAGGAGAGT TGTTGTTACA GGACTCGGGG CTTTAACCCC CATAGGTAAC
AATACGCAAA CATATTGGGA AAACTTAGTG AGAGGCACCA GTGGTGCAGC TCCTATAACA
CGTTTTGATG CTTCTAAACA CAAAACAAAA TTTGCGTGTG AAATAAAAAA TTATCATGAG
GAAGATCATT TTGATCGTAA AGAAGCTAAA AAGCTAGATC CTTGCTCTCA ATATGCTTTG
GTGGCTACAA AAGAAGCGAT AGAAGATGCA AAGCTTGACC TTAGTAAATT GGATTTGGAG
CGAATAGGAG TTTTATGGGG AACGGGTATT GGCGGTATAA AAAGCATACA AGACGAGATA
GTAACATTTG CCCAAGCTGA TATGGTGCCG AGGTTTAGTG CTTTCTTTAT TACAAAGATG
ATTGCTAATA TGCCTGCTGG TCAGATTTCC ATTAAATATG GACTAAAAGG CCCTAATTAT
GTTGCTGTTT CTGCTTGTGC ATCTGCTTCG AATGCGCTTA TTAGTGCCTC TCATCTAATC
CAATTAGGAT TAGCTGATGT AATGGTTACA GGTGGTTCGG AAGCTGCTGT TACACCTGTA
GCTATAGGCG GGTTTAATGT TATCAGAGCA TTGTCAGAAC GTAATGAAGA TCCTACAACT
GCTTCTAGAC CTTTTGATAA AGATCGAGAT GGATTTGTTT TAGGAGAAGG GGCTGGTGCT
TTGATATTAG AATCTTATGA GCATGCTATA GCTAGAGGAG CACAAATTTA TGCTGAAGTC
TTAGGTGCTG GTATGTCAGG CGAAGCTTAT CATATTACTG CGCCACACCC TGACGGTCAA
GGTGCCGCAC TGGTTATGAA GCAAGCATTA AAAAATGCAG GTATAAGCCC CCAAGAGATT
GATTATATTA ATGTACATGG TACTTCTACG CCTTTAGGAG ATGTAAGTGA AGTAAGGGCT
ATTCGAGAGT TATTTCAGGA ACATGCGTAT CAGTTGAATA TCAGTTCTAC TAAATCCATG
ACCGGCCACT TGTTAGGAGC AGCAGGCGCT ATTGAATCAA TAGCCTCTAT ATTAGCCATG
AAACATAGTA TAATTCCTCC TACTATTAAT CATTTTGAAT TAGATGATAC GCTGGATAAA
AATTTAAATT TTACCTTTAA TAAAGCACAA AATAGAGAAT TTTCAGTGGC CTTAAATAAT
AGTTTTGGGT TCGGCGGACA TAACACCTCT GTTATATTCA AGAAATGGAT AAATTAA
|
|---|
| Protein sequence | MQKIRRVVVT GLGALTPIGN NTQTYWENLV RGTSGAAPIT RFDASKHKTK FACEIKNYHE
EDHFDRKEAK KLDPCSQYAL VATKEAIEDA KLDLSKLDLE RIGVLWGTGI GGIKSIQDEI
VTFAQADMVP RFSAFFITKM IANMPAGQIS IKYGLKGPNY VAVSACASAS NALISASHLI
QLGLADVMVT GGSEAAVTPV AIGGFNVIRA LSERNEDPTT ASRPFDKDRD GFVLGEGAGA
LILESYEHAI ARGAQIYAEV LGAGMSGEAY HITAPHPDGQ GAALVMKQAL KNAGISPQEI
DYINVHGTST PLGDVSEVRA IRELFQEHAY QLNISSTKSM TGHLLGAAGA IESIASILAM
KHSIIPPTIN HFELDDTLDK NLNFTFNKAQ NREFSVALNN SFGFGGHNTS VIFKKWIN
|
|---|
| |