| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1200 |
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| Symbol | mnmA |
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| ID | 6376747 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | - |
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| Start bp | 1535879 |
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| End bp | 1537009 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642682301 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001958259 |
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| Protein GI | 189502542 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00132582 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAAG GCCGTGTATT AGTAGCCATG AGTGGAGGTA TAGATAGTTC TATTACAGCA
CTGTTATTGC ATGAACAGGG CTATGAGATA GTAGGATTGA CTATGAAGAC ATGGGATTAT
GTAAGCAGTG GTGGAAGAAA AAAAGAGACT GGTTGCTGCA GCCTAGACTC TATTAATGAT
GCACGCAATG TGGCTGTATC ATTGGGATTT CCTCATATTA TTTTAGATAT TCGAGAAGAG
TTTGGAGATT ATGTGATTAG TAACTTTACA AGCGAGTATT TAGCTGGAAG AACACCGAAT
CCCTGTGTTC TGTGTAATAC TCATATTAAA TGGGATGCGT TACTTAGGCG TGCTGACAAG
CTAAATTGTG AATATATTGC AACAGGTCAT TATGCGAACA TACGCCATGA AAATGGACGC
TATATAGTTT CGAGAGGGAA AGATTTGAAC AAAGATCAAT CTTATGCTTT ATGGGGAGTT
TCACAAGAAA GCTTAAGTAG AACTTTGCTT CCTTTAGGCG TATTTACAAA GCCTGAAATA
CGTGAAATAG CTAGCCAGCG AGGCTTTAAA GAATTAGTTA CTAAATCCGA GTCCTATGAG
ATTTGCTTTA TTCCAGACAA CGACTATCGT GGTTTCCTGA AACGGCGAGT AGATAATTTA
GAGGAGCAAG TAAAAGGAGG AGAATTTGTG TTGGAAGATG GAACCGTGGT AGGTCACCAT
GAAGGGTATC CGTTTTATAC AGTAGGCCAA CGGAAAGGTT TAGGCATAAC ATTAGGCTAT
CCTGTATATG TTACTGAAAT ACAAGCAGAC AAGAATAGGG TTGTATTAGG TACTTTTGAT
GAGTTAGCTA GAGATGGGAT GTATGTACAT AAATTAAATA TGGGTAAATA TCCTGATTTA
CAGGGGCGTA GGTTAGACAG CGTTACTAAA GTACGGTATA ATGATCCAGG TTCCCCTGCT
GTGCTCGAAC AAGATGGCGA TATAATGAAG GTATTTTTTG GAAAAGGAGT GCATGCAATT
GCCCCAGGAC AAGCTGCTGT ATTTTATGAA GGGGATGATG TAATAGGAGG GGGCTGGATT
AAGGCTTCTT TTAAGCAGCC TGCTTTTAAA AAGTATAATT TTTCTCAGTA G
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| Protein sequence | MKKGRVLVAM SGGIDSSITA LLLHEQGYEI VGLTMKTWDY VSSGGRKKET GCCSLDSIND
ARNVAVSLGF PHIILDIREE FGDYVISNFT SEYLAGRTPN PCVLCNTHIK WDALLRRADK
LNCEYIATGH YANIRHENGR YIVSRGKDLN KDQSYALWGV SQESLSRTLL PLGVFTKPEI
REIASQRGFK ELVTKSESYE ICFIPDNDYR GFLKRRVDNL EEQVKGGEFV LEDGTVVGHH
EGYPFYTVGQ RKGLGITLGY PVYVTEIQAD KNRVVLGTFD ELARDGMYVH KLNMGKYPDL
QGRRLDSVTK VRYNDPGSPA VLEQDGDIMK VFFGKGVHAI APGQAAVFYE GDDVIGGGWI
KASFKQPAFK KYNFSQ
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