| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1152 |
|---|
| Symbol | |
|---|
| ID | 6377464 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 1471506 |
|---|
| End bp | 1472525 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642682258 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001958217 |
|---|
| Protein GI | 189502500 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0666] FOG: Ankyrin repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCAAA GATTTATTAA GCATATTAAT AATATGATAG GATTATTGAT GGTGTTAGCT
ACATTTTCTC ATTGTGATGG CAAGCATAAA AGAAATGTAG ATGAAAAGGT AATTCTATCT
ACCCCTATTA CAGCAGAAAT GATACAGTTG GCTAGCGATA CAAGAAGATC TACATTATTG
AGAGCGCTCC AGTTACTTCA AGATGACTCA ATGCATGCTG TTAAAAACTC AAATAGTACG
GATATAGTAC AACTTTATTC TGATGCTTTG CAGCAAGCCA TATCTTTAGG CCACCTGCCT
ATAATACAAG CTTTACTATA CCATCAAATT AATATTAGTA CACTTGCTCA AAATAGATTT
TCTCCTTTAC ACTATGCAGT TTTTCAGAAA AATGAAGCGG TTTTTCAATT ATTAATCAAT
CAAGATCATA TTAATATAAA TTTGCGTGAT GCACAAGGTA ATACTCCTTT ACATTCAGCA
GTTTTAAAAG GCTGTTTTAA TATGGTTGAA ATACTATTGT TACGAGAAGA AGTTGATGTA
AATTCTGTCA ATAATAGCGG CTCTACTGTT TTGCACTTGG CTACTTCACG GGGTAATGTA
AAGACCATCA AACGACTACT AAGCTGTTTG GCTCTTGATA TCAATATACA AGATATAGAA
GACCAGAGTC CTTTACACTT AGCGATTGAC TGGGGAGATA TAGCAATCTT AGATGCGTTA
TTAGTTAGAA AGGACTTTCA GCTAAATTTG AGAGATAATA AGGGTCATAC GCCCCTTCAT
TTAGCAGTAC TTAAGGGTGA TGGTGAAAAG GTTACACGAC TTTTACAGGA GAGTGAGATA
GATGTGAATA TACAAGACAA TCATGGTAAC ACACCATTGC ATTTAGCAAC TAAAAAAGGT
TATTGGTCAA TAACTGCCGC ATTAAGGGAT AGAGGTGCTA AATTAAGCCT TAAAAATAAG
GAAGGTAAGA TACCTGCACA AATGGCCCCT AACTTTAAAA ATTATTCAAG GTATAATTAA
|
|---|
| Protein sequence | MLQRFIKHIN NMIGLLMVLA TFSHCDGKHK RNVDEKVILS TPITAEMIQL ASDTRRSTLL
RALQLLQDDS MHAVKNSNST DIVQLYSDAL QQAISLGHLP IIQALLYHQI NISTLAQNRF
SPLHYAVFQK NEAVFQLLIN QDHININLRD AQGNTPLHSA VLKGCFNMVE ILLLREEVDV
NSVNNSGSTV LHLATSRGNV KTIKRLLSCL ALDINIQDIE DQSPLHLAID WGDIAILDAL
LVRKDFQLNL RDNKGHTPLH LAVLKGDGEK VTRLLQESEI DVNIQDNHGN TPLHLATKKG
YWSITAALRD RGAKLSLKNK EGKIPAQMAP NFKNYSRYN
|
|---|
| |