Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_1120 |
Symbol | |
ID | 6377345 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | - |
Start bp | 1435593 |
End bp | 1437938 |
Gene Length | 2346 bp |
Protein Length | 781 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642682230 |
Product | hypothetical protein |
Protein accession | YP_001958190 |
Protein GI | 189502473 |
COG category | [A] RNA processing and modification [T] Signal transduction mechanisms |
COG ID | [COG5238] Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.829881 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAGGA CTTATACAAT ATCGCAGCAA TACATAGCTA ATGTTTTACT GATAAGCTTA TGCTTACAGA GTTGTGATGG GAATTCACCT ACTCCTATCC AAGAAAAGAA GATAGTCTTT ATGCAGGCAG AGGGAAATGT TTCTCTCATA AATATAGAGC CTTTAGTCGG AGAAGAAGTG ATAGCCCATG GAGGTCATGC TGTTACCCTT TATGTGAAAG ATGGTAGGAC AAAAGCAGAT GTTGTGCTGA ATACTGCTCA AGGATTTAGT AAAAGCTATG CAGGATTAAA CGTATACATT GAACAGGGTA CCAACGTTTC TATTTTTCCT CAATTAGATA AAAAGTTACA AGAGCGTCGT GTTCATCTGC AATTAGCCAA AGGTAGCCAG CCAGCAAAAG TAGTCATTTA TAAAGGAGTA GGGCTAGCAG GAGGGATGAT GCAAGGAGAA GGGGAAGTTG AGGAAGAATC GCAAGGGAGG AGAAAAAGAG CAAGGATTGA AATAGGAGAA GAACAGGAAG AAAATTTGAT TGAGCAAAAA CAAGGAATAA GTCCTTTTGA TATATTTCCC TCAGAAGTAT GGCAATATAT TTTTTCTTAT TTAAAGTTTA AAGATATTTT ACTAGCAAGA GCAGTTAATA AAGATTGGAA TGGACTGATC ACAGGCTTTA GAGAGGCAGG TGTAGTAGGA TTGGAGAATA AGCCTTCTTA TATTATTAAT GCACTTGGTT GGAGCAAAGA CGAGGAAATA GATTTTGCCA GTAATAAGTT AAGTACAATA AACTTCGAGA CAATGCCTAG TTTTGCTTTT TATAGCTTAA TGGGGAAAGT TAAGAATTTA CCCCAAGAGC TTAGGCCTTA TTTACAAGGG ACAAATGTAC ATACGGTTGA TTTAAATGAG AATCAAATAA GTGATCAAGG TGCAGAGGAA TTCGGTAAGC ATTTACAAGG AACAAACGTG CACATGGTTA ATTTAAGTAA TAACCAAATA GGTGCTCAAG GAGCAGAAGG GTTTGCCAAG CATCTAAAAA GAACAAAGGT ACATGCAGTT AATTTAAGCT TTAACAATAT AGGCAATCAA GGAGCAGAAG AATTCGGTAA GCATTTAAAG GAGACAAGGG TTCATACAGT TAATTTAAGT GGGAATGAAA TAGGCAATCA AGGAGCAGAA GAATTCGGTA AGCATTTACA GGAAACACAG GTGCATACGG TTGATTTAAG TGGGAATGAA ATAGACGATC AAGGAGCAGA AGGATTTACT AAGCATTTAC AGGGAACACA GGTGCAAGCG GTTAATTTAA GCTTTAATAA TATAAGCGAT CAAGGAGCAG AAGGATTTGC CAAGCATTTA AAGGAAACAA AGGTACATAC AGTTAATTTA AGCTACAATC AAATAAGCGA TCAAGGAGCA GAAGGATTTG CTAAGCATTT ACAGGAAACA CAAGTGCATA CGGTTGATTT AAGCGGGAAT CAAATAGGCG ATCAAGGTAT AGAAGAATTC GGTAAGCATT TACAAGGGAC AAATGTACAT ACACTTGTTT TAAGTGAGAA TCAAATAGAC GATCAAGGCG CAGAAGAATT CGGTAAGCAT TTAAAGGAGA CAAGGGTTCA TACGGTTGAT TTAAGTAAGA ATTACATAGG CGATCAAGGC GCAGAAGGAT TTGCTAAGTA TTTAAAGGAA ACACAAGTGC ATACGGTTAA TTTAAGCGGG AATCAAATAG GTGCAGAAGG AGCCGTAGGA TTAGCTAAGA ATTTACAGGG AACACAGGTG CATACGGTTA ATTTAAGCGG GAATGTAATA GGTGCTCAAG GCGCAGAAGG ACTTGCTAAG CATTTACAAG GAACAAAGGT GCATACGCTT CATTTAGCTG GAAATCGAAT AGGCGCTCAA TGCGCAGAAG CATTGGCTAA GCATTTACAG GGAACAAAGG TGCATACGCT TCATTTAAGT ATGAATCAAA TAGGCGCTCA AGGAGCAGAA GGATTTGCTA AACATTTACA GGGAACACAG GTGCATACGG TTGATTTAAG CTATAATCAA ATAGGCGATC AAGGCGCAGA AGCATTGGCT AAGCATTTAC AGGGAACACA GATGCATACG GTTATTTTAG CTGGGAATCA TATAGGTGCC CAAGGAGCAG AAGAATTCGC TAAGCATTTA CAGGGAACAC AGGTGTATAC GGTTAATTTA AGTGAGAACC ATATAGACGG TCAAGGAGCA GAAGGATTTG CTAAGCATTT AAAGGGAACA AACGTACATA CGGTTAATTT AAGCTTTAAT AGTATAGGCG CTGATATACA AAAATTATTA AAAGATAAGT ATGCTCATAT TAAGTGGGAA TTTTAA
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Protein sequence | MKRTYTISQQ YIANVLLISL CLQSCDGNSP TPIQEKKIVF MQAEGNVSLI NIEPLVGEEV IAHGGHAVTL YVKDGRTKAD VVLNTAQGFS KSYAGLNVYI EQGTNVSIFP QLDKKLQERR VHLQLAKGSQ PAKVVIYKGV GLAGGMMQGE GEVEEESQGR RKRARIEIGE EQEENLIEQK QGISPFDIFP SEVWQYIFSY LKFKDILLAR AVNKDWNGLI TGFREAGVVG LENKPSYIIN ALGWSKDEEI DFASNKLSTI NFETMPSFAF YSLMGKVKNL PQELRPYLQG TNVHTVDLNE NQISDQGAEE FGKHLQGTNV HMVNLSNNQI GAQGAEGFAK HLKRTKVHAV NLSFNNIGNQ GAEEFGKHLK ETRVHTVNLS GNEIGNQGAE EFGKHLQETQ VHTVDLSGNE IDDQGAEGFT KHLQGTQVQA VNLSFNNISD QGAEGFAKHL KETKVHTVNL SYNQISDQGA EGFAKHLQET QVHTVDLSGN QIGDQGIEEF GKHLQGTNVH TLVLSENQID DQGAEEFGKH LKETRVHTVD LSKNYIGDQG AEGFAKYLKE TQVHTVNLSG NQIGAEGAVG LAKNLQGTQV HTVNLSGNVI GAQGAEGLAK HLQGTKVHTL HLAGNRIGAQ CAEALAKHLQ GTKVHTLHLS MNQIGAQGAE GFAKHLQGTQ VHTVDLSYNQ IGDQGAEALA KHLQGTQMHT VILAGNHIGA QGAEEFAKHL QGTQVYTVNL SENHIDGQGA EGFAKHLKGT NVHTVNLSFN SIGADIQKLL KDKYAHIKWE F
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