Gene Aasi_1098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1098 
Symbol 
ID6376730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1412564 
End bp1413022 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content37% 
IMG OID642682210 
Producthypothetical protein 
Protein accessionYP_001958170 
Protein GI189502453 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.26429 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATTACCA TTTATACAGA CGGTGCTTCT AGTGGAAATC CAGGCCCTGG TGCTTATGCT 
GCTATTTTAC AGTACAAAGA CTATAGCAAA GAACTAGTAC AAGGATTTAG AAATACTACC
AACAATCGTA TGGAATTATG GGCGGTTATT GCTGGCTTAG AAGCTTTAAA GAAAGATAAA
CAACACATAG TAGTTTATTC AGACTCTCGC TATGTAGTAG ATGCTGTTGA AAAAGGTTGG
CTTCAAAGCT GGATAAAAAA AGGCTTTAAA GGTAAAAAGA ACATAGATTT GTGGAAAAGA
TTTTGGAGTT TATATGTAAA CCATCATATT ACGTTTAATT GGGTTAAAGG CCATGCAGGA
GATCCTAAAA ATGAGCGTTG TGATAAGCTA GCTACTGGAC GTATAAGAAC TGGCCCTTTA
GGTATAGATG AATGCTATGA AAGTGAGCTA CAAGTCTAG
 
Protein sequence
MITIYTDGAS SGNPGPGAYA AILQYKDYSK ELVQGFRNTT NNRMELWAVI AGLEALKKDK 
QHIVVYSDSR YVVDAVEKGW LQSWIKKGFK GKKNIDLWKR FWSLYVNHHI TFNWVKGHAG
DPKNERCDKL ATGRIRTGPL GIDECYESEL QV