Gene Aasi_1062 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1062 
Symbol 
ID6377233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand+ 
Start bp1375083 
End bp1375643 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content39% 
IMG OID642682175 
Producthypothetical protein 
Protein accessionYP_001958136 
Protein GI189502419 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATAA CAAAAACGCC AACTTTAGGC TTAACAATTA TTGGGCCAGA ATTAAAAACT 
GACCAGCGTG GTTATTTTAT GGAATGTTAT CATCAAGAAA AATTAACTCA GCTAGGTATA 
CACAACCAAT TTGTACAAGA AAACCAGTCC TTTTCTAAAA AAGGAACCAT TAGAGGTTTA 
CATTATCAGC TTAATCCGTA TGCGCAAGCA AAGCTTATTC GTGTAATAGA CGGAGCAATA 
TGGGATATAA TCGTAGACCT CCGACAAGGA AGTACTACCT TTGGCCAGTG GGAGGGCATT 
ATGCTTTCGG CTGAAAATAA TAAACAGCTA CTGATACCGC GTGGTTATGC CCATGGATTT 
GCGGTCATGA GCCAGGAAGC GACCATTATT TATAAATGTG ACAATTTTTA CCATCCAGAA 
GCAGAAGCGG GCATTCACTG GCTAGATCCT GAGTTAGCAA TAGACTGGAA AATAAATGCC 
CCTCCTCTAC TCTCTGCCAG AGATCAACAA TTACCATGTT TAGAAAAAGC GATTATTAAC 
TTTGATTATC AATCGTTATG A
 
Protein sequence
MQITKTPTLG LTIIGPELKT DQRGYFMECY HQEKLTQLGI HNQFVQENQS FSKKGTIRGL 
HYQLNPYAQA KLIRVIDGAI WDIIVDLRQG STTFGQWEGI MLSAENNKQL LIPRGYAHGF 
AVMSQEATII YKCDNFYHPE AEAGIHWLDP ELAIDWKINA PPLLSARDQQ LPCLEKAIIN 
FDYQSL