| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1036 |
|---|
| Symbol | dapD |
|---|
| ID | 6376861 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | + |
|---|
| Start bp | 1342490 |
|---|
| End bp | 1343314 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642682152 |
|---|
| Product | 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase |
|---|
| Protein accession | YP_001958113 |
|---|
| Protein GI | 189502396 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2171] Tetrahydrodipicolinate N-succinyltransferase |
|---|
| TIGRFAM ID | [TIGR00965] 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTCATT CAACTTGGAT ACAAACCATA GAAAATGCCT GGAAAGACAG GACATTACTT
AAACAGACAG ATGTACAAAC TATAATACGA AGCATAATAG CTGCATTAGA TATAGGTGAA
GTCCGTATAG CTATGCCTAC TGATGAAGGT TGGCAAGTTA ATGAGTGGGC TAAGAAAGCA
ATTTTACTAT ACTTTCTTAT CCAGGAAATG GAAATAATGG AAATCGGCCA ACTATCGTTC
TATGATAAAA TTCCTTTAAA GCACAGCTTT AAAGAGCTAG GAGTGCGAGT AGTGCCTCCT
GCAGTGGTTA GATATGGTAG TTGCTTAAAG CCAGGTGTTA TTTTGATGGC TTCTTATGTA
AATATTGGTG CTTATATAGG TGAAAGTACC ATGATAGATA TAGGTGCTGC TGTAGGAAGC
TGTGCCCAGT TAGGTAAAAA TATTCATTTA AGTGCTGGAG CTGTTATTGG AGGAGTATTG
GAGCCACTCC AGGCAAAACC TGTTATTATA GAAGATGATG TGTTTATTGG AGCAAAATGT
ATTGTTGTAG AGGGAGTAAT AATAGGACGT GGGGCTGTAT TAGGGGCAAA TGTTACTTTA
ACAGCTAGCA CACGTATACT AGATGTAACT GAACCTGGTA AGCCTAAACA GTATCGTGGA
TATGTTCCTG AAAATTCTGT TGTTATTCCA GGTTCCTATC CTAAACAATT TCCTGCAGGG
GAATACCAGG TTCCTTGTGC CCTTATTATT GGAAAGAGGA ATCAAAATAC AGATTCTAAA
GTATCTCTAA ATGAAGTACT TAGAAGTTAC GACCTAAACC TTTAG
|
|---|
| Protein sequence | MTHSTWIQTI ENAWKDRTLL KQTDVQTIIR SIIAALDIGE VRIAMPTDEG WQVNEWAKKA
ILLYFLIQEM EIMEIGQLSF YDKIPLKHSF KELGVRVVPP AVVRYGSCLK PGVILMASYV
NIGAYIGEST MIDIGAAVGS CAQLGKNIHL SAGAVIGGVL EPLQAKPVII EDDVFIGAKC
IVVEGVIIGR GAVLGANVTL TASTRILDVT EPGKPKQYRG YVPENSVVIP GSYPKQFPAG
EYQVPCALII GKRNQNTDSK VSLNEVLRSY DLNL
|
|---|
| |