Gene Aasi_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1035 
Symbol 
ID6376937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand- 
Start bp1341364 
End bp1342026 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content38% 
IMG OID642682151 
Producthypothetical protein 
Protein accessionYP_001958112 
Protein GI189502395 
COG category[K] Transcription 
COG ID[COG1321] Mn-dependent transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCA GTCATTCAGA AGAAAATTAT ATTAAAACGA TTTACCAGCT TTCTCATGGA 
GGACAGCAGC TAGTAACAAC TACGACTTTA GCACATGCCT TACATACTAG CCCCGCAGCA 
ATCACAGACA TGATCCAACG GCTACACCAG AAAAACTTAA TTGCGTATCA AAAATATCAA 
GGCGTAAATT TAGCTCCATT GGGGAAAGAG CACGCTATGC AAATACTACG AAGACATAGA 
TTATGGGAAG TATTTTTGGT AAAAAAGCTT AGGTTTGCAT GGGACGAGGT AGAAAAGGTA 
ACCGAAGAAC TCGAGCATAT TCACTCTGAT CTTCTGATAC AGCGATTAGA TGATTATTTA 
GGTAACCCTT CACACAGTCC ACAAGGTGAA CCTATTCCAG ATAAAAACGG ACAAATAAAA 
ACACAACCAC AAATGGTGCT CAGCCAACTG GAAGTAGGAA ATACGGGTAT TATTGTAGCT 
GTAAAAGATG GATCAGCAGC TTTCTTACAA TATCTTAGTA AAAAAAATAT TTACCTCGGA 
GCCATGGTTA AAGTGCTAGA AAAGATTACC TTCGACCAGT CTATGGAGAT AAGCATTGAT 
GGAAGAAACA ATACCAATGT ATCACTTAAG GTAAGCGATA ATTTGTTAGT AGTATATCAA 
TAA
 
Protein sequence
MQLSHSEENY IKTIYQLSHG GQQLVTTTTL AHALHTSPAA ITDMIQRLHQ KNLIAYQKYQ 
GVNLAPLGKE HAMQILRRHR LWEVFLVKKL RFAWDEVEKV TEELEHIHSD LLIQRLDDYL 
GNPSHSPQGE PIPDKNGQIK TQPQMVLSQL EVGNTGIIVA VKDGSAAFLQ YLSKKNIYLG 
AMVKVLEKIT FDQSMEISID GRNNTNVSLK VSDNLLVVYQ