Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_1030 |
Symbol | |
ID | 6377189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | - |
Start bp | 1336382 |
End bp | 1337071 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642682146 |
Product | hypothetical protein |
Protein accession | YP_001958107 |
Protein GI | 189502390 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCTA ATAGAGTAGC ATGGAAAACT TATTTCCAAC AGACTATTGA CGAATGTATC AACATAGGTA TTTGCTCTAT TACAATTGTT TCCATTGTTT CTATATTTAT AGGTGCTGTA ACGTGTATTC AGATTAGCTA TAATCTTAAG TCCCCTTTTG CTCAAGATTT CTTGGTAGGG TTTGGTGTAC GTAATATGGT TATATTAGAA TTAGCTCCTA CGGTAATGGC TATTATATTT GCTGGGAAAG TAGGCTCTAA TATTGCCAGT CAGCTAGGTT CTATGCGTAT TACTGAACAA ATCGATGCTT TGGAGGTCAT GGGAATTAAC CCAACTACTT ATCTGGTACT ACCTAAAATC ATCGCTAGTA TATTCATGTA TCCATTACTA GTTATTTTAT CAGGATCCTT AGCTATTTAC AGTGGATATT TGGCTGCAAA ATTTGTATTA ACCATGGCAG CTGAAGATTA TATATATGGA ATCCGTTTTA TGTTTGAACC TTATACTATC CAATTTGCCA TTTATAAGTC AATAGCTTTT GCTTTCTTGG TAAGTTCGAT TGCTTCTTAT AAAGGTTTCT ATGTGTTTAG AGGAGCTGTG GCAGTAGGGC AAGCAAGCAC AGAAGCTGTG ACTAATAGTT GTATTGCCAT TTTAGCAGCT GATTATGTAT TAACCCAATT GCTTTTGTAA
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Protein sequence | MFSNRVAWKT YFQQTIDECI NIGICSITIV SIVSIFIGAV TCIQISYNLK SPFAQDFLVG FGVRNMVILE LAPTVMAIIF AGKVGSNIAS QLGSMRITEQ IDALEVMGIN PTTYLVLPKI IASIFMYPLL VILSGSLAIY SGYLAAKFVL TMAAEDYIYG IRFMFEPYTI QFAIYKSIAF AFLVSSIASY KGFYVFRGAV AVGQASTEAV TNSCIAILAA DYVLTQLLL
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