Gene Aasi_1030 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1030 
Symbol 
ID6377189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1336382 
End bp1337071 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content35% 
IMG OID642682146 
Producthypothetical protein 
Protein accessionYP_001958107 
Protein GI189502390 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0767] ABC-type transport system involved in resistance to organic solvents, permease component 
TIGRFAM ID[TIGR00056] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCTA ATAGAGTAGC ATGGAAAACT TATTTCCAAC AGACTATTGA CGAATGTATC 
AACATAGGTA TTTGCTCTAT TACAATTGTT TCCATTGTTT CTATATTTAT AGGTGCTGTA
ACGTGTATTC AGATTAGCTA TAATCTTAAG TCCCCTTTTG CTCAAGATTT CTTGGTAGGG
TTTGGTGTAC GTAATATGGT TATATTAGAA TTAGCTCCTA CGGTAATGGC TATTATATTT
GCTGGGAAAG TAGGCTCTAA TATTGCCAGT CAGCTAGGTT CTATGCGTAT TACTGAACAA
ATCGATGCTT TGGAGGTCAT GGGAATTAAC CCAACTACTT ATCTGGTACT ACCTAAAATC
ATCGCTAGTA TATTCATGTA TCCATTACTA GTTATTTTAT CAGGATCCTT AGCTATTTAC
AGTGGATATT TGGCTGCAAA ATTTGTATTA ACCATGGCAG CTGAAGATTA TATATATGGA
ATCCGTTTTA TGTTTGAACC TTATACTATC CAATTTGCCA TTTATAAGTC AATAGCTTTT
GCTTTCTTGG TAAGTTCGAT TGCTTCTTAT AAAGGTTTCT ATGTGTTTAG AGGAGCTGTG
GCAGTAGGGC AAGCAAGCAC AGAAGCTGTG ACTAATAGTT GTATTGCCAT TTTAGCAGCT
GATTATGTAT TAACCCAATT GCTTTTGTAA
 
Protein sequence
MFSNRVAWKT YFQQTIDECI NIGICSITIV SIVSIFIGAV TCIQISYNLK SPFAQDFLVG 
FGVRNMVILE LAPTVMAIIF AGKVGSNIAS QLGSMRITEQ IDALEVMGIN PTTYLVLPKI
IASIFMYPLL VILSGSLAIY SGYLAAKFVL TMAAEDYIYG IRFMFEPYTI QFAIYKSIAF
AFLVSSIASY KGFYVFRGAV AVGQASTEAV TNSCIAILAA DYVLTQLLL