| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0995 |
|---|
| Symbol | |
|---|
| ID | 6377169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | + |
|---|
| Start bp | 1294440 |
|---|
| End bp | 1295678 |
|---|
| Gene Length | 1239 bp |
|---|
| Protein Length | 412 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642682117 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001958078 |
|---|
| Protein GI | 189502361 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0520] Selenocysteine lyase |
|---|
| TIGRFAM ID | [TIGR01976] cysteine desulfurase family protein, VC1184 subfamily
[TIGR01979] cysteine desulfurases, SufS subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.20271 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAACTT CCACACCTCA ATCTATTATA TGGACTCCAC AAGAAATTAG GCGACAATTT
CCTAGCCTTG AGCAAAAGGT GCATGGGAGT AAGCCATTGG TTTATCTAGA TAATGCTGCC
ACTACTCAGA AGCCGCAGAC TGTATTAGAT GCGCTTATCC AGCATTATAA TTATAGTAAT
GCCAATGTAC ATCGGGCCAT GCATGTTTTA GCAGATAGAG CTACAGAAGC TTTAGAAGAC
ACTAGAAAAA CTGTACAAGA ATTTATCAAT GCGCCAGGAG CTGAAGAAAT TATATTTACT
TCAGGTACTA CGGCTAGTAT TAATTTAGTA GCTAGTAGTT ATGGGCAAGT TTATATACAG
CCAGGAGACG AGATTATTAT TTCTCATATG GAGCATCATG CTAATATAGT CCCTTGGCAG
ATGCTATGCC AAACAAGGAA AGCTCATCTT AAAGTAATTC CTATTGATGA TAGAGGGGAG
CTGATAATGT CTTCTTTTGA ACAGTTGTTA ACTGCAAAAA CCAGACTTGT AGCTGTTGCC
TATGCTTCTA ATAACTTAGG CACTATTAAT CCCATCCAAG AAATTATAGC TAAAGCACAC
CATGCAGGAG CTTTAGTATT AATAGATGCT GCCCAAGCAG CAGCCCACTT ACTTATAGAT
GTACAGAGTT TAGATTGTGA TTTTCTGGCT TTTTCAGCAC ACAAAGCTTA CGGACCTACA
GGGGTAGGTA TTTTATATGG AAAAAGAGCA TTACTAGAAC AAATGCCCCC TTATCAAGGA
GGGGGGGAAA TGATTAAGGA AGTAACCTTA TCTAGTAGTA CTTATAACGA CATACCTTAC
AAATTTGAGG CTGGCACCCC TAACATTGCG GATATTATAG GCTTTCGAGC AGCTTTGGAC
TTTATCCGAA ACTTAGGATG GTCGATTATT AACAAACATG AAAAAGAATT AACTAGCTAT
ACACAGCATC TTTTAGGCAA AATTGATAGA ATTAGACTTA TTGGCACAGC AACAGATAAG
GTAGGAATTG TATCTTTTAC AGTAGATAAA ATGCATCATT TAGATGTAGG AATGTTGTTA
GATGCACAAG GTATTGCTGT AAGGACGGGC CATGGTTGTG CCCAGCCACT TATGCAGCGG
CTGGGAGTAG AAGGTATTGT ACGTGTATCT TTGGCTGTAT ATAATACTTT TGAAGAAATA
AATTATTTAG CACATGTAGT AGCTAAAATA GTGAAATAA
|
|---|
| Protein sequence | MITSTPQSII WTPQEIRRQF PSLEQKVHGS KPLVYLDNAA TTQKPQTVLD ALIQHYNYSN
ANVHRAMHVL ADRATEALED TRKTVQEFIN APGAEEIIFT SGTTASINLV ASSYGQVYIQ
PGDEIIISHM EHHANIVPWQ MLCQTRKAHL KVIPIDDRGE LIMSSFEQLL TAKTRLVAVA
YASNNLGTIN PIQEIIAKAH HAGALVLIDA AQAAAHLLID VQSLDCDFLA FSAHKAYGPT
GVGILYGKRA LLEQMPPYQG GGEMIKEVTL SSSTYNDIPY KFEAGTPNIA DIIGFRAALD
FIRNLGWSII NKHEKELTSY TQHLLGKIDR IRLIGTATDK VGIVSFTVDK MHHLDVGMLL
DAQGIAVRTG HGCAQPLMQR LGVEGIVRVS LAVYNTFEEI NYLAHVVAKI VK
|
|---|
| |