Gene Aasi_0982 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0982 
Symbol 
ID6377087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1282637 
End bp1284403 
Gene Length1767 bp 
Protein Length588 aa 
Translation table11 
GC content37% 
IMG OID642682106 
Producthypothetical protein 
Protein accessionYP_001958067 
Protein GI189502350 
COG category[V] Defense mechanisms 
COG ID[COG1132] ABC-type multidrug transport system, ATPase and permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.44347 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAATC CTTACTTTCG CTTGATTCGT ACTATATGGC ATTACGGGGT ACCTTGGCGT 
GGTACTATTG TAGGTTACTA TATAGCTTAT ATCTTGGCAC GTGCCATTAG AAATTTAGCT
CCTTATGCAT TTGGAAGAAC TATTGACATA CTACAAAACT TCAAGCCAGA TCGTCTTGAA
GAAGTTATTT ACTGGCTTAT TGTAGGCGTA GGCGTTGTGT TGGTGTATTG GTTGTTACAT
GGCCCCACAC GTGTTATTGA GCGCAACACA GCATTAAAAA TCCAGCAAGC TTTTCAACTA
AATCTATATG AAAAGCTTAC ACAACTACCT CTCAAATGGC ATCAAGAGCA TCATTCGGGT
AATACTGTAA CACGTATTAA CCGTGCCTCT AATGCACTCT ATGACTTTGC CGAAGATCAA
TTTATCTACA TCCAAACTAT TGTTACGTTT TTTACTTCCA TTGTATTTTT ACTGTGGATT
TCGCCAGTAG TAGGAGTGTT GAGTCTTATT ACTTCTGCTC TTTCTATGTT TACAGTCATT
TGGTTCGACC GTAAACTAAC CCGTCTATAT GATACACAAA ATGAAATAGA GAACAAATTG
GGCGCAGTAT TATTTGATTA CCTTAATAAT ATGACTACGG TGCTGACCTT GCGACTTGGT
AGTTTAACGC ATGGTAATCT GGCACAATGC ATGAAGTCTA TTTGGCCATC TTTCAAAAAA
GATGTTGTAA CCAATGAAGT TAAATGGTTT ACAATGGAAA TGCTGCTAAC AATATCACAA
ACCATAATTC TTATAGGTTA TATTATCTAT ACTTTACATG CAACAGGTGC CATTATGATT
GGTGTGGTGA TTATGATTTT TCGCTATCAA TGGGAGCTTG GTTCAGTTTT CCAAGAGCTT
AGTATTCATT ATAGCCGACT AGTACATATG AATACAGATA TTGAGACTAT AGAACCACTA
CTTAGCGATA TTAAGAAGTT CGCACACAAA CCAGCAGGTA TAGAGGTTGC TCGTCAATGG
CATACTATAC AGGTACGAGA ACTTTGTTTT CAACATAATA AGGTTGCTGA CAATAAACCT
ACTTTTAACG ATTTAAGCTT TACTATACAA CGTGCGGAAA AGATAGCACT TATTGGGTCA
AGTGGTGGTG GCAAAAGTAC TTTATTAAAT CTATTAAGTG GACTTTACAC ACCCTCAAAA
GTTAATCTTC TAATTGATGG AGTATCCTTT GATATCTTAG AACCACTTCA AAGTATAGCA
ACACTTATTC CACAGGATCC TGAAATCTTT GAGAATACCG TTTATTTTAA CATTACTATG
GGATTGCCTG CAGAACCGGC TGAGTTACAA CATATTATGC AATTGTCAAG ATTTTCAAGT
GTATTAGAAA AGCTTTCAGA AGGGTTAGAA ACCTATATCC ATGAAAAAGG ACTTAACCTA
TCTGTCGGAC AGAAACAGCG TTTGGCACTT GCCCGTGGAT TGTTTGCAGC ACGTTTTAGC
TCTCTTATTT TAATGGATGA GCCTACCTCA AGCTTAGACT TACAAACAGA AAAAGAAATT
TTTTCTGATG TTATCCGTAA CTTACAAAAT TCTACAATGA TTATTTCCTT ACACCGGCTA
CATCTTCTAC CGCTCTTTAG TAGAATTATC ATGCTAGACA AGCAAGGAAT TGTAGCAGAT
GGCTCTGCTA AAGAGTTACT AAATGAGCCA GGAGTTGTAC GTGATTTATG GAAAAAATAT
CAGGCACATT CAGAAAATGA AAACTAA
 
Protein sequence
MNNPYFRLIR TIWHYGVPWR GTIVGYYIAY ILARAIRNLA PYAFGRTIDI LQNFKPDRLE 
EVIYWLIVGV GVVLVYWLLH GPTRVIERNT ALKIQQAFQL NLYEKLTQLP LKWHQEHHSG
NTVTRINRAS NALYDFAEDQ FIYIQTIVTF FTSIVFLLWI SPVVGVLSLI TSALSMFTVI
WFDRKLTRLY DTQNEIENKL GAVLFDYLNN MTTVLTLRLG SLTHGNLAQC MKSIWPSFKK
DVVTNEVKWF TMEMLLTISQ TIILIGYIIY TLHATGAIMI GVVIMIFRYQ WELGSVFQEL
SIHYSRLVHM NTDIETIEPL LSDIKKFAHK PAGIEVARQW HTIQVRELCF QHNKVADNKP
TFNDLSFTIQ RAEKIALIGS SGGGKSTLLN LLSGLYTPSK VNLLIDGVSF DILEPLQSIA
TLIPQDPEIF ENTVYFNITM GLPAEPAELQ HIMQLSRFSS VLEKLSEGLE TYIHEKGLNL
SVGQKQRLAL ARGLFAARFS SLILMDEPTS SLDLQTEKEI FSDVIRNLQN STMIISLHRL
HLLPLFSRII MLDKQGIVAD GSAKELLNEP GVVRDLWKKY QAHSENEN