| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0966 |
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| Symbol | |
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| ID | 6377097 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | - |
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| Start bp | 1258346 |
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| End bp | 1264783 |
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| Gene Length | 6438 bp |
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| Protein Length | 2145 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642682092 |
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| Product | hypothetical protein |
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| Protein accession | YP_001958053 |
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| Protein GI | 189502336 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3063] Tfp pilus assembly protein PilF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.360119 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAC GATCTTGCTT GTTTGGCTAT TTACGTAATA TTTATCTATT AATCAAATTT
CTACCACTTG GAAGAATCCC TGGATTATTA ATACAGTTAT TCTTGATTGT TCCTACTCTT
ATAGGACTTA AAAGTATAGA GCTAGATACA GCTTCTCAAC AACCAACTGT CTTAGCAACA
CATTCTAGTG TGATAGAAAA AGAAGAAAAA GTTTCATTTT CAGGGGTAAC AGAACAAACA
CTAGCACCAC ACCAAATTAG TAGCCAACCT TTTGAGCAAA TACTAGCTTC TTTGCATAAC
AATAATCCAC AAGTATATGC AATAAGCTTA ACACACGAAC AATTAAATCA AGAAAAGCTC
CAACAGCTTC AAGAAGCCAT TGCTAACAAT AGCATTATTG GATTTATTCA GTGGGGACAA
GTGCCTGTAG AGTGTGAACA CATCAAAGAA CAAATACAAG AAAAGATAAC AAAAAATATA
TACACGTATA CCTACTATCC TACTGATTAT ATACATGGGC TATTGGCATA TCAAGTTTAT
AGCAATCCTA AGTTAGGTCA AACCATAGAT CTTACTGTTG TAAGTAAAGA GGTAGGACAC
CAACTGCGCC CTAGCATACA TACAAACTGG AAAGTAATAC AGTTAAAAGA TGATAGCAAA
AATACAGGCT ACTATAGTGC ATTATATATC AATGAGATCA CTCACCAAGC TGTATTGTCT
TTCCAAGGTA CTAAAGTAGA AGGCCTTAGA ACACTAGCAC GAAAATATTC TGATTTAAAA
GAAGGTATTG ATGGCGTACT TGGCAATGTT ATTACACAAC AAAATGCTTT AGCTTATGTA
GCCACAAAAG ATGCTGTTGA CTATGCCAAA GACAAAGAAT TCAATTTATC CATTACTGGC
CACTCCTTAG GTGGTTATTT AGCAGAGCTA GCCGTTGCTT TCTGTTATCG TGATTTTAGC
TATCGACAAA CAAAATGCAT TGTCTTTGAT AGCCCTGGTA CAGTCAATAA ACTCGATAAG
TTCAAATCAA ATGTAGTCAA CAAAGCTACC AAATTTTCTA TAGCTTCTCT GCCCATTATT
ACTTACCTAT CTGCTCCCAA CTTAATCAAC ACTTGCAATG GACACCCTGG AGAAGTATAT
AGGGTATATC CACAACTCAT GTGGTCAGCT GAAATACATA AATGGGCTAA AAGGGCTAGC
AATGTACCCC TGATTGGTAC TAATCTAAAA GACAAAAATA AGGGGCTTCT AACCCTTACA
GGCCATAGTC TATCCACCAT ATTATCCTTG TTTGACCCCA CAACAGGCAA ACCAAGCACC
TATATACGTA TAGCAGACTG GCCTAAACTA GATACGGATA ATATTGCTCA TATAGGAAAG
AAGAAAGAAG AATTAGAAAA AGATACCCTC CTCAAAACTG GCTTATCTAT CCTTACTGGA
AAAACAAATG TAATTGGTGG CGCTTTTCAA ATTCTTCCGT CCCTTATAGG AGGTACTGCA
GCCAGTGTAT TGTCTGTACT AAAAGATTGC TTAAATATCA ACCAAGCTCA ATATTGGACT
ACGCTAGCTT ACCTAGATGA TCATTATAAA GAAACCAAGC TAGCTTCACA AAAAGAGTTT
AACCTCCGCT ACAAAGGACA TTATCGTATT AGCGACAAAC CTATCAATGA GCATATTTTG
TATACAGAGA ACTATGAAGG AGTTGACTGG TATCTCTATG AGCTATATAA ATACAAAGAT
AAACTAGCTC AGTCGCCAAC AAGAGATATA ACTTTTGCTG TGCTCAAAAA CATTTTACAA
GATTATGAGG TAGTAAGCTT AGATGAGCAG CCTTATGTAC GGTTAGTAGA CAAGCAAGGA
TATGTAGAAG TTTTGCGCGA TAAGATGCAA CGATCACTCA AAGTATTGAC AGCTGCTAGT
ATTAAGAAAA CACTAGAAGA CAGCAACATT GATGCATTAA CCAAGCAGCT AGAAAAAAGG
TCCATCAAAC AATTTAGCCA GCTCCACAAC TATATAGCAC AAGCTAAGTT AACAACCTAC
TTAGCCAGAG AAGATAAGCA GCAAGAGCTA AGCCAAAAAC TTAATAAAGA TGGTGTTTGT
GTGGTATATG GCCATGGCGG TGTAGGAAAG AGTACGCTTG TAGCCCAGTA TGGACATAGC
CAAAAAGACA AGCAACTTAT ATGGTGGATG CAAGCGGAAA CAGCCGATAA ATTAGTAAAA
AGCTACCAAG ACTTAGCAAA AGAACTAGGC ATCGACTATC AGGAGCTAGC ACAAGGATTC
AAACAATCTT ATGATAACTA TCTACCCGAG CTCAGCAAGA GGGTTTACAA TGCACTAGAA
GACCGTAAGC AGCCTATCTT ACTCATTTTA GATAATGCAG CAGATGCCCA TCTAATAGCA
AATTGCTTAT TGTATAGGCC TAACTTAGTA CAAATGGTTA TTACAACCAG GAAAGCAAGA
GAATTTAGTG CTTACAGCCA AGTCAAACTA GCTGCCTTTA AACAAGAACA AGCAGAGAAA
TATGTGGAAA CATATTTAAA CAATAGTTTA TATCAACCTA CTAAACAAGA GGTGGCAGCC
TTAATAAAAG AAGTAGGCCT TATTCCTCAA AATTTAGCTT TAGCAGTTGG TTATATCAGT
CAAAAGCGTT TAATAACCAT CCAAGGTTAT ATCGACAAAC TGCAATCTAT TAAGAAACTA
GAGAAAAAAA GCGAGCACCA GTTTGTTTTA CCTGAAGTAA GTTTAGGATT AGAAAGTCTA
GACGCACAAG CACAGTTAGT AATGCGCTAT GGTGCTTACT TAGACCCGGA TTTTATCCCT
TTACCTTTAA TCAGTGCCTT GGTAGAGATA AAAGATGAGG AAACATTAGA AAATCTATTA
AGTGCATTAG AAGAGTTATC TTTGATTACC ATTATCAAGT GCCATCAAAA TGAGCTAGGT
ATACAGATCC ACCGAGAAGT GCAAGCAGCT ACCAAGCAGT ACCATGGGTG GAAAAATACA
AGTAACCTCT CAGAAGAAGC ATTATTATGT TCTATTGCTA AGGTGTTGCA TGAGCTTGTA
CCTGAAGTAA CGGAAGTACC TGACAATACA TGGGACCAGG CAAAAGTCTA TGCAACCAAC
GTAGCACATG TATTATCCAC TATTAAACAA ACTATAAAAC CAACACCTTT GTTAGCTGAC
TTGCTCAGCC GAACAGGCAA GTATAACCAA CAAGTAAAAA GTAACTTTGA ACAAGCATTA
CAATACAATC AGCTAGCACT TGTAATGAGG CAGGCCTTGT ATATAGGCAA TCATCCTGAC
ATAGCTACCT CACTCAATAA CTTAGGGGAG ATTTATAAGT CTTTAGGACA GTATCAAGAA
GCATTAAAGT ATTACCAGCA GTCTCTTACA ATGAGACAAG TATTGTACAT AGGCAACCAC
ACTGAATTAG CGGAGTCACT TAATAACATA GGGTTAGTTT ATAAAGCTTT AGGAAAATTC
CAGGAATCGT TAAGGTATTT AAAACTAGCT TTTGACATAC GTAAAGCCTT ATACATAGGC
AATCATCCTG CTATAGCTGA ATCGCTCAAT AATGTAGGAA GGGCTTATAA AGCTTTAGGC
CAGCATCAAG AGGCTTTAAA GTATTATCAG CAAGCACTTG ACATGAACAA GGTGATATAT
GCAGGCAATC ACCCGCATGT AGCCAAGTTA CTCAATAACT TAGGAGGTAT CTATAAAACT
TTAGGGCAAT ACCAAAAAGC TTTAAAATAT TATCAACAGG CACTTGGGAT GCGCAAGTCA
TTGTATACAG GCAATCATCC GCATGTAGCT CAGTCAATTA ATAGTGTAGG ACATATTTAT
CAAATTCTAG GCCAGTATCA AGAAGCATTG AAGTATTATC AAGAAGCGCT TGAGATGCGT
AAGGCGTTAT ATAGAGGCAA CCATCCGGAT GTAGCTCAGT CGCTTAATAG TATAGGAAGC
GCCTGGAAAG CTTTAGGCCA ACATCACAAA GCTTTAGAAT ATTACCGACA AGCATCTGAC
ATGCGTAAGG CATTATACCC AGGCAACCAT CCTCGGATAG CTGATTCGCT TACTAACTTA
GGATTAGTTT ACAGGAGATT GGGTCAGCAT CAAGAAGCAT TGAAATATTA TCAACAAGCA
CTTGAAATAC GTAGAGCACT ATATATGGGC AATCATCCTG ATATAGCTAA CTCCTTTAAC
GATCTAGGAA ATATTTACAA AACTTTAGGA CAATATCAAG AAGCATTGAA GTATTATCAA
CAAGCACTTG ACATGCAAAA AGCATTATAT ACAGGCAATC ATCCTGATAT AGCACGGTCG
ATCAATAACA TAGGATTTAT TTATCAAGCT TTAGGTGAGT ACCAAGAAGC ATTAAAGTAT
ATCAAGCAAG CCCTTGACAT GCGTAAGGCA TTATATACAG ACAATCATCC TCAAGTAGCA
CAATCCCTCA ATAACTTAGG AAATATTTAC AAAACTCTAG GACAATATCA AGAAGCATTG
GAGTACTTAC AACAAGCCCT TGACATGAGA AAGGACTTGT ATAAGCACAA ACATCTTGAT
ATAGCTATTT CACTCATTAA CCTAGGGAAT ATTTACCAAT CTGTAGGACA ATATCAAGAA
GCTTTAAAGT ACTATCAACA AGGTCTTGAT ATGCAAAAAG GATTATATTC AGGCGATCAT
GCTGATATAG CAATGTCACT AAACAACATA GGAAATATTT ATAAAATTCT GGGCCAGCAT
CAAGAAGCAT TGAAATATTA TCAACAAGCT TTTGAAATAC GCAAAGTATT TTATGCAGGT
AACCATCCTG ATATAGCCAT TTCACTCAAT AGCTTGGGAA ACATTTGTAA AACACTAGGC
CAGTATCAAG AAGCATTAAA GTACTATCAG GAAGCTTTAG GAATACGCCA ATCTTTATAT
ATAGGCAACC ATCCTGATAT AGCAGAATCA ATTAATAATA TCGGATTTAT TTATCAAGCT
TTAGGTGAGT ACCAAGAAGC ATTAAAATAT TTGAAGTATG CTCTTGAAAT GCGGCAGGCA
TTATATATAG GCAACCATCC CGATATAGCT ATTTCGCTTA ATGATTTAGG AGATATTTAC
CAAGCTTTAG GCCAGCATCA AGAAGCTTTA AAGTACTATC AACAAGCCAT TAACATGCAA
AAAACATTGT ATACAGGCGA TCATCCTGAC ATAGCTATTT CCCTGGACCA CATAGGAAAC
ATTTATCAAG CCCTAGGCCA GTATCAAGAA GCTTTAGAGT ACTACCAGCA AGCCTTCAAA
ATGCAGAAGG TATTTTATAC TGGCAACCAT CCTGATATAG CTACTTCACT CAATAGCTTA
GGACATGCAT ATAAGTTGCT AGGAAATTAT CAAGAGGCTT TTAAATATTA CCAACAAGCA
CTAAATATTC ATCAAGTATT ATATAAAGGC AATCATCCTG CTATAGCTAC TTCATTGAAA
AATTTAGGAG ATACTTATTA TACTTTAAGC CAGTATCAAG AAGCATTAGA GTATCACCAG
CAAGCACTTG ATATAAAAAA AGTATTATAT AAAGGCAATC ATCCTGCTAT AGCTATTTCA
TTGATTAGCT TAGGAGATGA TTATAGGGCA TTGGATCAAT ATCAAGAAGC CTTAACGTAT
TATCAGCAAG CATTGGAAAT TCGAAAAAGC TTATACATAG GCGATAATCC TTTTATAGCT
ACTTCATTAA ATAGTTTAGG AGATATTTAT CAAGCATTAG GCCAACATCA AAAAGCTTTA
ACATATTACC AGCAAGCATT TGATATGAGA AAAGTTTTAT ATAAAGGCAA TCATCCTACT
ATAGCTATTT CTATTAATAA CTTAGGCAAA GTTTACCAAG CTTTAGGCCA ACACCAAGAG
GCCTTAAAGT ATTATCAGGA AGCATTAGAA AAAAGAAGGA CTTTATATAA AGGGTACCAT
CGTAGTATAG CTACTTCATT GAATAACTTA GGAGACGTTT ACCAAGCTTT AGGACAGCAT
CAAGAAGCCT TAACATATTA TCAGCAAGCA CTTGATATGA GAAAAGCTTT ATATAAAGGC
AATCATCCGG CTATAGCTGT TTCATTAAAT AACTTAGGAA ATGTTTACCA AACTTTAGGA
CAACACCAAG AAGCCTTAAC ATATTATCAG CAAGCGCTTG ATATGAGAAA AGGCCTATAC
ACAGGTAACC ATGCTGCTAC AACTACTTCA TTGGATAACC TAGGAAATGT TTATCAAGCT
CTAGGGCAGC ACCAAGAAGC ATTGAAGTAT TATCAACAAG CACTTGATAT GAGAAAAATA
TTGTATACGG GTAACCATCA TGATATAGTT ACTTCATTCC ATAACTTAGG AGCTGTTTAT
CAAGCGCTAG GCCAGCATCA AGAAGCTTTA AAATATCATC AACAAGCACT CGACATGCAG
AAACAACTTG TAGCCTAA
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| Protein sequence | MKIRSCLFGY LRNIYLLIKF LPLGRIPGLL IQLFLIVPTL IGLKSIELDT ASQQPTVLAT
HSSVIEKEEK VSFSGVTEQT LAPHQISSQP FEQILASLHN NNPQVYAISL THEQLNQEKL
QQLQEAIANN SIIGFIQWGQ VPVECEHIKE QIQEKITKNI YTYTYYPTDY IHGLLAYQVY
SNPKLGQTID LTVVSKEVGH QLRPSIHTNW KVIQLKDDSK NTGYYSALYI NEITHQAVLS
FQGTKVEGLR TLARKYSDLK EGIDGVLGNV ITQQNALAYV ATKDAVDYAK DKEFNLSITG
HSLGGYLAEL AVAFCYRDFS YRQTKCIVFD SPGTVNKLDK FKSNVVNKAT KFSIASLPII
TYLSAPNLIN TCNGHPGEVY RVYPQLMWSA EIHKWAKRAS NVPLIGTNLK DKNKGLLTLT
GHSLSTILSL FDPTTGKPST YIRIADWPKL DTDNIAHIGK KKEELEKDTL LKTGLSILTG
KTNVIGGAFQ ILPSLIGGTA ASVLSVLKDC LNINQAQYWT TLAYLDDHYK ETKLASQKEF
NLRYKGHYRI SDKPINEHIL YTENYEGVDW YLYELYKYKD KLAQSPTRDI TFAVLKNILQ
DYEVVSLDEQ PYVRLVDKQG YVEVLRDKMQ RSLKVLTAAS IKKTLEDSNI DALTKQLEKR
SIKQFSQLHN YIAQAKLTTY LAREDKQQEL SQKLNKDGVC VVYGHGGVGK STLVAQYGHS
QKDKQLIWWM QAETADKLVK SYQDLAKELG IDYQELAQGF KQSYDNYLPE LSKRVYNALE
DRKQPILLIL DNAADAHLIA NCLLYRPNLV QMVITTRKAR EFSAYSQVKL AAFKQEQAEK
YVETYLNNSL YQPTKQEVAA LIKEVGLIPQ NLALAVGYIS QKRLITIQGY IDKLQSIKKL
EKKSEHQFVL PEVSLGLESL DAQAQLVMRY GAYLDPDFIP LPLISALVEI KDEETLENLL
SALEELSLIT IIKCHQNELG IQIHREVQAA TKQYHGWKNT SNLSEEALLC SIAKVLHELV
PEVTEVPDNT WDQAKVYATN VAHVLSTIKQ TIKPTPLLAD LLSRTGKYNQ QVKSNFEQAL
QYNQLALVMR QALYIGNHPD IATSLNNLGE IYKSLGQYQE ALKYYQQSLT MRQVLYIGNH
TELAESLNNI GLVYKALGKF QESLRYLKLA FDIRKALYIG NHPAIAESLN NVGRAYKALG
QHQEALKYYQ QALDMNKVIY AGNHPHVAKL LNNLGGIYKT LGQYQKALKY YQQALGMRKS
LYTGNHPHVA QSINSVGHIY QILGQYQEAL KYYQEALEMR KALYRGNHPD VAQSLNSIGS
AWKALGQHHK ALEYYRQASD MRKALYPGNH PRIADSLTNL GLVYRRLGQH QEALKYYQQA
LEIRRALYMG NHPDIANSFN DLGNIYKTLG QYQEALKYYQ QALDMQKALY TGNHPDIARS
INNIGFIYQA LGEYQEALKY IKQALDMRKA LYTDNHPQVA QSLNNLGNIY KTLGQYQEAL
EYLQQALDMR KDLYKHKHLD IAISLINLGN IYQSVGQYQE ALKYYQQGLD MQKGLYSGDH
ADIAMSLNNI GNIYKILGQH QEALKYYQQA FEIRKVFYAG NHPDIAISLN SLGNICKTLG
QYQEALKYYQ EALGIRQSLY IGNHPDIAES INNIGFIYQA LGEYQEALKY LKYALEMRQA
LYIGNHPDIA ISLNDLGDIY QALGQHQEAL KYYQQAINMQ KTLYTGDHPD IAISLDHIGN
IYQALGQYQE ALEYYQQAFK MQKVFYTGNH PDIATSLNSL GHAYKLLGNY QEAFKYYQQA
LNIHQVLYKG NHPAIATSLK NLGDTYYTLS QYQEALEYHQ QALDIKKVLY KGNHPAIAIS
LISLGDDYRA LDQYQEALTY YQQALEIRKS LYIGDNPFIA TSLNSLGDIY QALGQHQKAL
TYYQQAFDMR KVLYKGNHPT IAISINNLGK VYQALGQHQE ALKYYQEALE KRRTLYKGYH
RSIATSLNNL GDVYQALGQH QEALTYYQQA LDMRKALYKG NHPAIAVSLN NLGNVYQTLG
QHQEALTYYQ QALDMRKGLY TGNHAATTTS LDNLGNVYQA LGQHQEALKY YQQALDMRKI
LYTGNHHDIV TSFHNLGAVY QALGQHQEAL KYHQQALDMQ KQLVA
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