| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0923 |
|---|
| Symbol | |
|---|
| ID | 6377160 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | + |
|---|
| Start bp | 1183314 |
|---|
| End bp | 1184912 |
|---|
| Gene Length | 1599 bp |
|---|
| Protein Length | 532 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 642682056 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001958017 |
|---|
| Protein GI | 189502300 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.018408 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGAC AGGATAATTT AAGAAGACAA TTAATGGCCT GCAGTATAGT TATAAGCTTG
CTTTTACAAA GCTGTACTGG CCTCTCTAAC CCATCCATTG CTACAGAGAA AGGGCAAACA
GATAATATTG AGAGGGTTAC TAATCAAGTT TCAATTAGTA ATAGTAAGAA ACTAAATCAT
AGAGAGCCTT TATACCAAAA GGGAAGCCAG TTGCAAGCAA TAGGAAGAGA AGAACTCTCA
GAGGGGAATT TCTCTAAACG CCAGCAATCA GGTTATGGAT ATGTAGGTAA AGGAAGCCTC
AAAGGAGTAG TAGATAGAGG TCAGGAGAAA GAGAAGGAAA AAAAGAGAAA AAGAAAAAAG
GAAAAAAATC AAAGCCAGAC TCCAAAGGTA AAAAGGGAAA AGACAGGAGA TCCGAGCCAG
GCAATGGAGA TAAAGAAAGG AGCAGAAGGA AATAGGAGTC AGAACCTGAA ACGGAAAAGA
GAAAAAGTGG AAGAGCGTAA AACGTTTAAG AAACACCGAA AACTAGAAGA TTCAGATAAG
ACCAATAAAG AAACTAAGGA AAACGGAAAG AATAGCCCTA AGATAAAAAG CCAGAGTAAA
AAAAAGCCTA TAATACCAGA CAGTCTAGAA ACAATTAATA AGCGAGTTAA AAAAAAGAGA
AGAAGTGTAA ACAATGATCA TATTGTAAAG GTAGGCATAT TCAATCTTCC TTCTGAGCTC
CTAGAAGTTA TCCTATCTTA CTTATCATTC CATGAAATGA TGCTAGCCAG ACAAGTAAAT
TATCATTTTT ATACCCTTAC CACAGGCTAT GACAAAGTAG GAGCAGTTGG TGCAGAAAAT
AAGCCCAGCC GTCTTATTAA TATACCTACC TGGTCACTCA AGCATGCTAT AGATTTCGAT
AAGTTAAAAG ATAAACTTGC CGACATGCCC AGTTTTGTTT TTTATCAGTT GATGAGGGAA
GTAAAATGGT TACCGAAGAT CTATTGGGCT CATTTGAAAG AAACTCAGTT GCATAAAGTT
GTTTTATTTC GTGACAACGA GGGCGCTACA GAATTAGCAG GCTTTAGTAA GGTTTTGCAA
AAGAGTAATA TTCGTTCACT TAGATTATGG TTTGTACGAA ATGGAGTTGC AGCAACTCAG
TTTAAAAATT TGAAACGTAA TAATAAGCTA CAAGAGTCGA GTTTATATAA TAATAATAAA
CTAGGAGATC GAGGAGTAGG CAAATGGACT AGAAGTTTGA GAGCATCTAA TGTGCAAAAG
TTTGATTTAA GTGATAATAA GATCGGTCCT GTAGGAGCAT GGAAATTGGG TAAGGGTTTA
AGAGGAACTC AAGTTCGTAA AATTAATCTA GAGTTGAATA ACATAGGAAT GCTAGGAGTG
ATAAAATTAA CTAAACAATT GAAATATACC AATGTGGAAG AGATTAATTT AAGTTCTAGT
GATGTGGTAC ACTTGTCAGA TGTTGAAAGT ATAATAAAAT TTACTCAAAA CTTGCAAGAA
ACCAAGGTGA ACACGATTAA ATTGAAGAAT ATGGCGGTAG ACAAGATCAG AAAAAAAATT
TTAAGTGAGC AGTGTCCACA TATCAAGTGG ATATTTTAG
|
|---|
| Protein sequence | MKRQDNLRRQ LMACSIVISL LLQSCTGLSN PSIATEKGQT DNIERVTNQV SISNSKKLNH
REPLYQKGSQ LQAIGREELS EGNFSKRQQS GYGYVGKGSL KGVVDRGQEK EKEKKRKRKK
EKNQSQTPKV KREKTGDPSQ AMEIKKGAEG NRSQNLKRKR EKVEERKTFK KHRKLEDSDK
TNKETKENGK NSPKIKSQSK KKPIIPDSLE TINKRVKKKR RSVNNDHIVK VGIFNLPSEL
LEVILSYLSF HEMMLARQVN YHFYTLTTGY DKVGAVGAEN KPSRLINIPT WSLKHAIDFD
KLKDKLADMP SFVFYQLMRE VKWLPKIYWA HLKETQLHKV VLFRDNEGAT ELAGFSKVLQ
KSNIRSLRLW FVRNGVAATQ FKNLKRNNKL QESSLYNNNK LGDRGVGKWT RSLRASNVQK
FDLSDNKIGP VGAWKLGKGL RGTQVRKINL ELNNIGMLGV IKLTKQLKYT NVEEINLSSS
DVVHLSDVES IIKFTQNLQE TKVNTIKLKN MAVDKIRKKI LSEQCPHIKW IF
|
|---|
| |