Gene Aasi_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0872 
Symbol 
ID6377071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1107194 
End bp1108618 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content36% 
IMG OID642682009 
Producthypothetical protein 
Protein accessionYP_001957970 
Protein GI189502253 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0617] tRNA nucleotidyltransferase/poly(A) polymerase 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATTATA GCAATTGGCT GAAAAAATAT CCTGTATTAC AAAAAATTGG AGATACGGCA 
GATCGGCTTG GGATAGAAAC TTGTGTAGTA GGCGGATTTG TTCGTGATTT GTTTTTGCAG
CGTCCTTCCA AAGATATTGA TATTGTATGT GTAGGTAATG GTATTGAATT GGCACAAGCA
GTTGCGCAAG AGCTAGGAGA AGATATAGTT GTACATATAT TTAAAACTTT TGGTACGGCT
ATGTTACGCT GGCAAGATAA TGAAGTAGAG TTTGTAGGCG CTAGGAAGGA ATCTTATAGT
CGTGATTCTA GGAATCCTGA AGTGACGCAA GGGACCCTTG TTGATGATCA GTTGCGGAGA
GACTTTACAA TTAATACACT TGCCATTCGA ATAAATAAAT CTCAGTGGGG GGAGTTGATT
GATGACTTAG GTGGAGTATC AGATTTGCAA CAGAAAATCA TTAAAACTCC TTTAGACCCA
GGTATTACTT TTTCTGATGA CCCACTGCGC ATGATGCGTG CTATTCGTTT TGCTACTCAA
CTACGTTTTA CTATAGATGA GGTTACGTTG ATGTCTATTC AGCAGCATGC AGAACGTATT
AAAATCATTT CTCAAGAAAG AATTACCGAG GAATTAAACA AGATTATATT GGCTGATATC
CCTTCTAAAG GGTTTAAATT ATTATTTGAC ACTGGCTTGC TCAAACTCTT CTTTCCGGCA
CTAGTAAATC TACAGGGTAA AGAGACAATT CAAGGATACA CCCATAAAGA TAATTTTTAT
CATACATTAC AAGTTTTAGA TAATATAGCC AAGCATACTA ATAATTTGTG GCTACGGTGG
GCTGCCATTT TACATGATAT TGCTAAGCCA TTAACTAAAA GTTTTAGTCC AGAAATCGGA
TTTTCTTTTC ATGGACATGA AGATTTAGGA GCTAAGCTAG TTCCAAAGAT TTTCAGACAG
TTAAAGTTGC CACTTTCTGA AAAAATGGAG TATGTACAAA AATTAGTTCG TTTACATTTA
AGGCCTATTG CAATAGCACA AGATGTGGTA ACAGATTCGG CTGTTAGAAG ATTGATTTAT
GAAGCAGGAG ATGATTTAGA AGATTTGATG CTATTGTGTA GAGCAGATAT TACTTCCAAT
AATCCTACAA AAGTAAAGCA ATACCTTGGA AACTTTGATA AGGTAGAAAG AAAGGTAATA
GAAGTAGAAG AAAGAGATCA GATTAGGAAT TTGCAGCCTG TTATTACAGG AGATATTATT
ATGCAAACTT TTCAACTTAA ACCTTCTAGG ATGATAGGAG AAATAAAAGC TGCCATTAAA
GAAGCTATTC TAGAAGGAGA GATTCGGAAT GAGTATGAGG AAGCCTTTAC CTATATGTTG
CAGATTGGCA AGTCTTATGG ATTAGTTCCA ATTTCTTCAC ACTAG
 
Protein sequence
MNYSNWLKKY PVLQKIGDTA DRLGIETCVV GGFVRDLFLQ RPSKDIDIVC VGNGIELAQA 
VAQELGEDIV VHIFKTFGTA MLRWQDNEVE FVGARKESYS RDSRNPEVTQ GTLVDDQLRR
DFTINTLAIR INKSQWGELI DDLGGVSDLQ QKIIKTPLDP GITFSDDPLR MMRAIRFATQ
LRFTIDEVTL MSIQQHAERI KIISQERITE ELNKIILADI PSKGFKLLFD TGLLKLFFPA
LVNLQGKETI QGYTHKDNFY HTLQVLDNIA KHTNNLWLRW AAILHDIAKP LTKSFSPEIG
FSFHGHEDLG AKLVPKIFRQ LKLPLSEKME YVQKLVRLHL RPIAIAQDVV TDSAVRRLIY
EAGDDLEDLM LLCRADITSN NPTKVKQYLG NFDKVERKVI EVEERDQIRN LQPVITGDII
MQTFQLKPSR MIGEIKAAIK EAILEGEIRN EYEEAFTYML QIGKSYGLVP ISSH