| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0847 |
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| Symbol | |
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| ID | 6377178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | - |
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| Start bp | 1071665 |
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| End bp | 1073944 |
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| Gene Length | 2280 bp |
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| Protein Length | 759 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642681986 |
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| Product | hypothetical protein |
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| Protein accession | YP_001957947 |
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| Protein GI | 189502230 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5422] RhoGEF, Guanine nucleotide exchange factor for Rho/Rac/Cdc42-like GTPases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0400711 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATAGCA CTTCTAAAAG AATCATAGCT TTTATTTTAC TGAGTAGTCA ATTACTAACA
ACCACTAGTT GTAATGGCAA TTTTAATATA CCTATCGAGC CACAGATAGT CCATACACAT
CATCAACAAG TAGATAAGAA ATGGAGCCAA GACAATGCAT TAGTGCCTCT AACCAGTGAA
TTAGGGTTTG ATGAGTGTAA AAAAGATGAC GCTCCAGATC AATCTTTAAC CAATCAGTTG
CCCTTAGTTG AAAGTAATAG TGCTTCTGCC ACAGAAGGTA AAGCTCTCTT TGTAGGACGC
TCTAAAACTT TAAAGAAGAA TAAAGAGCAG AAGTCGGTAT CGAGTCAAGC AAAAACTTTT
ACAACGCCGG TTTATATAGA TAGACCCACA GGTTACAGTA GAAAGCTTAC TCACGATAAA
GCTATAGGGG ACAAGCATTT TACTACCTTA AATAAGAGTA AGGATTTAGA TTCTTATAGA
GAGCAAGCTC GAGCCAGCCA GAAACAAGTT AGTGAGCTTA GCGATATAGC ATTAAATGTT
ACTGTTGCTG AGCTTCTTAC AATAGACCAA GGTTTAATAG CAAAAGGAGG CCATCAAGTA
TATCTAACCG TTGTAGAAGG CAAGTGGATG GCAATTGTTA AAGAGAATGC TCCTATAGGT
TTTAGTAGAA CGCAGTATTT GGATTTATAT CTAGCACCTG GTTTTACAAC CAACCAGTTA
AGTAAACATA GCCCTGAATG GCAAGAGGCA CATATAGGAG TAGTATTTCC TGAAAAAAGT
TCAACTGGCA AAGGGTATGT ATATATAGGT GACGGGGGGC TGCTCGGTGG TGGGAATAGT
GGTTCCAAAG GAGGCGGTGG AAATGATAGC GATAGGACAT CTAGCAGAAG TGAATCTAGT
GAGAGGAGTA CATCTGGCTC TAGCCACAGT TCAAGTAGTA GCAGTGGTAG AGCAAGTCAT
AATATTGGAA GCTCACATAG TAGTTTCAGT ATGCCAAAAA CTTCATCTTC CAGTTCCCAT
CATCGAGATA GCTTTAAGGA TTTTTGTAAT AAGAGTTCAG CTAATGTTTC AGCTTCGTTA
TCTTCTGCAG GTATAAAGCA TGATACCCAT AGCACTTCCC ATACTAGTGA TAGTTTTAAG
GATTTTTGTG ATAAGAGTTC AGCTAATGTC TCAGCTATGT TATCTTCTGC AGGTATAAAG
CATGATACCC ATAGCACTTC CCATTCTAGC TTCTCCAGCC ATACTAGTTC ATATTCTAGC
AGCAGGGCAT CTAACCAAGC TGCTAGTAGC AGTAATAGTG AAAGTAAGCC TGCTGCTTCT
AAGGAGTCAT CCTCTTCAAG CAAAGAATCT AAAGCCCCCC ATCTTACCCT AGAGAATGCA
GCTACGGAGG TGAGAAAGCA CATACAAGAG GCTAAAAATG ATGGTCCTAA AGCTACGAGT
GTATCAGCCA GCCAGCAACA ACAAGCAAAA GGGGAGCAAC TACTTAAACA GCTACGTGAA
ATCAAGCAAC AACAGGAACG GTCGTATAGC CAAACACAGA CCGCTTACAT TACACCAGGT
AATTCTGAAA TAGGGAATAA GCTGTTGTTA GACCAGCTAA CCAAAAAAGG TCAAGAATTG
TCTACTTTAA AAGAATTAGA GTCAGAGCTA ACACAAAGCT TAGAGCGCGA GCGTCCAACT
AGCCATTATG AGGAAACAAG AAAAGAATCA ATACTAGCTA GTGCTACAAC TACACCAAAA
GAGATTAAGG TAAAAGATAA AGGAAAAGAA AAGGATACAA GCTTGACACC TGGTACTACC
CAAGCAACAA ATAACCTTCA TAGTACAACC CTATCTTCGT CTGGGGACAT TTCTACTGCT
ACAAGTACTA CTGAACCACT ACTCAGCACA CCCACTAAAG GTCCAGCAGT TAAAGTTGAG
AGTGGTACAC GTAAGACAAA AATACCCTAC AATGATAGAG CGGACAGTTT TAGCTATGAC
CACTACTCTT CAAGCACTAG CACAAATACA CCTGCTGTAT CAGCTACAGA GCCTACTAAC
CCGGCTACAT CTAGTACTAC TTCCACTAGT ACTACTGATA AAAGTGAAGC AGAAATTCAT
AACCAGTGGA GTGATTTGTT AAAGGAAATA CAAGTCCAAT TGGGACATTC CAAAATACAA
GGTTTAGCAG ACGCTCTATA TCTACAAAAA CAGGCTAGAT TCTATATAGA AAAATTAAAG
TCGTATGAAA AATATAAATG CATTAGCAGA TCTTCCCTCG AGCAAGCACT CACTCAATGA
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| Protein sequence | MYSTSKRIIA FILLSSQLLT TTSCNGNFNI PIEPQIVHTH HQQVDKKWSQ DNALVPLTSE
LGFDECKKDD APDQSLTNQL PLVESNSASA TEGKALFVGR SKTLKKNKEQ KSVSSQAKTF
TTPVYIDRPT GYSRKLTHDK AIGDKHFTTL NKSKDLDSYR EQARASQKQV SELSDIALNV
TVAELLTIDQ GLIAKGGHQV YLTVVEGKWM AIVKENAPIG FSRTQYLDLY LAPGFTTNQL
SKHSPEWQEA HIGVVFPEKS STGKGYVYIG DGGLLGGGNS GSKGGGGNDS DRTSSRSESS
ERSTSGSSHS SSSSSGRASH NIGSSHSSFS MPKTSSSSSH HRDSFKDFCN KSSANVSASL
SSAGIKHDTH STSHTSDSFK DFCDKSSANV SAMLSSAGIK HDTHSTSHSS FSSHTSSYSS
SRASNQAASS SNSESKPAAS KESSSSSKES KAPHLTLENA ATEVRKHIQE AKNDGPKATS
VSASQQQQAK GEQLLKQLRE IKQQQERSYS QTQTAYITPG NSEIGNKLLL DQLTKKGQEL
STLKELESEL TQSLERERPT SHYEETRKES ILASATTTPK EIKVKDKGKE KDTSLTPGTT
QATNNLHSTT LSSSGDISTA TSTTEPLLST PTKGPAVKVE SGTRKTKIPY NDRADSFSYD
HYSSSTSTNT PAVSATEPTN PATSSTTSTS TTDKSEAEIH NQWSDLLKEI QVQLGHSKIQ
GLADALYLQK QARFYIEKLK SYEKYKCISR SSLEQALTQ
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