| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0808 |
|---|
| Symbol | |
|---|
| ID | 6376969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | + |
|---|
| Start bp | 1025423 |
|---|
| End bp | 1026610 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642681950 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001957913 |
|---|
| Protein GI | 189502196 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1262] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR03524] gliding motility-associated lipoprotein GldJ
[TIGR03530] gliding motility-associated lipoprotein GldJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.178792 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATC TGTCGTATTT TATTCAAAAA ACTATTGTAA TCATATTATT AACAGGACCC
TTAGCAGCTT GTGGTAACAC TAAGCCTAGT AGTTCTAAAC CAGGTAAGTT CAGTACGGCA
ACAGGTATGC GTTTTAACCA AGAGGGGGGA TTTCAGGTAA CTCCTTTTAA AAAACAAGCA
GTAGGGCCTA GTATGGTATT TATAGAAGGT GGTACTACCA CTATAGGTGT TTTTGGGGAA
GATATAAAGA ATAGCCCTAA AAAACGTGTT ACTGTAACTT CTTTTTACCT CAAGGAAACT
GAAGTAACCA ACATAGAATG GCAAGAATAC TTGCATGATC TAAAAGAAAA TTATTCTGAT
GAAGAATACA AGGCTGCGCT CCCCAACGAA CAAGTGTGGG TAAGTGATTT AGGACATAAT
GACCCTTATG TGTATAATTA TAGTAGAGAG CCTGGTTTCT ACTTTTATCC TGTAGTGGGT
GTAAGCTGGA CTCAAGCTAA AAAATATTGT GACTGGCTTA CAGAAAAACT TAATGCACAG
CAAGCAGATA AATCTCAAAG TGCACAAAAT TTACAAGATC CAGGTAATCA AAATGCAGAG
GACACAGAAG ATAAAACAGC TGCTATGGGT TATAGATTGC CAACAGAAGC AGAATGGGAA
TATGCTGCAC TGGCTATGGT AGGTACTCAA GATTTAGATT TTGTACAGTC TACCCAACGT
GTATATCCTT GGGGCGACGG TCTTTCTTTA AGAGGTAAAG AAGACGAGTG GAAAGGTAAA
TATTTAGCCA ACTTTAAACG TTCTCCAGGC AACTATAAAG GATTACCAGG GGAAAGTAAT
AGTAGTGCAC CTACTACTCC TGTTTATCAT TACCCTGCTA ATGATTTTGG ATTATATGAC
ATGGGCGGTA ATGTAAGTGA ATGGGTAAGC GATATTTATA GGCCTATATC TTTTCAAGAC
CTGGATGATT TCAATCCTAT TAGGCGTGAT GATACATTAG ATCCAGAAAG AGATTATGAT
CAAAATAATT CTTTAATTAA CAACAGAGCC AGAGTTTATA AAGGAGCCTC TTGGAAAGAT
TGTGCACATT GGGCAAAAGT AGGTACTAGA AGATTTTTAG ACCAAGATTC TTCAACCGCA
ACGATTGGCT TTAGATACGC AATGAGTAGT ATGGGAGGGG ATGAATAA
|
|---|
| Protein sequence | MKNLSYFIQK TIVIILLTGP LAACGNTKPS SSKPGKFSTA TGMRFNQEGG FQVTPFKKQA
VGPSMVFIEG GTTTIGVFGE DIKNSPKKRV TVTSFYLKET EVTNIEWQEY LHDLKENYSD
EEYKAALPNE QVWVSDLGHN DPYVYNYSRE PGFYFYPVVG VSWTQAKKYC DWLTEKLNAQ
QADKSQSAQN LQDPGNQNAE DTEDKTAAMG YRLPTEAEWE YAALAMVGTQ DLDFVQSTQR
VYPWGDGLSL RGKEDEWKGK YLANFKRSPG NYKGLPGESN SSAPTTPVYH YPANDFGLYD
MGGNVSEWVS DIYRPISFQD LDDFNPIRRD DTLDPERDYD QNNSLINNRA RVYKGASWKD
CAHWAKVGTR RFLDQDSSTA TIGFRYAMSS MGGDE
|
|---|
| |