Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0806 |
Symbol | secA |
ID | 6377012 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | + |
Start bp | 1021204 |
End bp | 1024554 |
Gene Length | 3351 bp |
Protein Length | 1116 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642681948 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_001957911 |
Protein GI | 189502194 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.211513 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAAAC TCTTTACTAA GCTGTTTGGT ACTAAATCTG AAAGGGACTT AAAGTCCATT CGCCCCTATG TGGAAAAGAT TAATCTGGAA TATGAGAAAT TGGTATCTCT TACTAATGAT GAGTTACGTA AAAAAACTGA CTCCCTAAAA CAATATATCA AAGTTGAGAC ACAAGAATTT ATAGGAGAGC TTGAAATAAG AGAAAGGCAA CTAGAAGCTA CTACCCAGTT AACTCCAAAG GAAGTAGAAG ATTTATACAT ACAAATCAGC CGTATTAAAG AGCAATATAA TACGCAGCTA GAAAAAGTAT TATTGGACAT CTTGCCACAA GCATTTGCTA TTGTAAAGGA AACAGCCAGA AGATTTAAAG AAAATGAACA GCTTATTGTA ACAGCAACTG GTTATGATAG AGAGTTGGCT ATTACAGAGA AACATATTGA TATTGAAGGT GATCAAGCTA TTTGGAAAAA TCAGTGGGAA GTAACAGGGC ATTTGCTTAC CTGGGACATG GTACATTATG ATGAGCAGCT CATAGGAGGT GTTATTTTGC ACAAAGGTAA AATTGCAGAA ATGGCGACAG GTGAGGGTAA AACGCTAGTT GCAACGCTAC CTACATTTTT AAATGCATTG GTAGGAAAAG GTGTACATAT TGTAACTGTT AATGAATACC TAGCTAAACG TGATGCTGCT TGGATGAAGC CTATTTATCA ATTTCATGGA TTTACTGTAG CGTGTATTGA AGAAACATCC CCTTATTCGG CAGCTAGAAG AGAAGCTTAT CAGGCAGACA TTACTTATGG TACCAACAAT GAGTTTGGCT TTGATTACCT ACGCGATAAT ATGGCTTCGC AACAAGAAGA GGTGGTACAG CGAGAACATC ATTACGCCAT TGTAGATGAG GTAGATTCTG TTTTAATCGA TGATGCAAGG ACACCCCTTA TTATTTCAGG ACCAGTTGAA AAAGGTAATG AGCAGGAATA TATAACCTTT AATCCACGTA TAAAGCGCCT TTATGAAGCA CAAAAACAAA TTGTAAACCA ATTTTTACAA GAAGCTAAAA GCCAAATGGT GGCAGGAAAA AACGACGAAG CAGGATTGCC ATTGTTTAGG GCTTATAGGG GGCTTCCTAA ATACAAGCCA CTTATTAAGT ACTTGAGTGA GCCAGGAGTT AAGCAGTTGC TTCATAAGAC AGAGAATTAT TATATACAAG ATAATTCTAG AATGATGCCA GAAGCAGACG AACCTCTTTT ATTTACCATA GATGAAAAGC ATAATACTGT AGAATTAACT GAAAAAGGGT TAGAATATAT TACCCAGCAA GGAGAAGATC CTGACTTTTT TATTTTACCG GATACAGCTA CTGCAGTAGG AGAAATAGAA AGTGATGCTG GTTTAGATAA CCTTGAAAAA GAGCAAAAGA AACAAATACT CGCACAAGAA TATGCTATCA AGTCGCAACG TATCCATGCA GTACAGCAAC TTCTAAAAGC TTATGCACTC TTTGAAAAGG ATATAGATTA TATCCTAGTA GATGGTAAAG CAAAAATTGT AGATGAACAA ACCGGACGAG TATTAGAAGG ACGCCGTTAT TCAGATGGCT TACACCAAGC TATAGAAGCA AAAGAAGAAA TAAAGATTGA AAAAGCTTCT CAAACCTATG CTACCATTAC TTTGCAAAAC TATTTCCGGC TTTACCATAA GCTAGCAGGT ATGACAGGTA CAGCTGAAAC AGAAGCAGGT GAATTTTACG ATATTTATCA TTTAGATGTA GTAGTAACAC CTACGCATAA GCCTGTAGTC CGGGAAGATA AGGATGATAA AGTATATAAA ACAGTCCGAG AAAAGTTTAA TGCTATTATT GAAGAAATAA CTGTATTGGC TAATCAAGGA CGACCAGTGT TAGTAGGTAC CACTTCCGTG GAAATTTCTG AATTGGTAAG TAAAATGCTT AATCTTCGAA AGATTAAACA CCAAGTTCTT AATGCTAAAC ACCATCAGAA GGAAGCTGAA ATTGTGGCTG AAGCTGGAAA GCCTGGAACT GTAACAATTG CTACTAATAT GGCTGGTAGG GGAACAGACA TTAAACTTAG CCCAGAAGCT AAAGCAGCAG GTGGCTTGGC TATTATTGGT ACAGAAAGGC ATGAATCTCG TAGGGTAGAC AGACAGCTTA GAGGACGTGC TGGTAGGCAA GGGGATGTGG GTTCTTCCCA ATTTTTTGTG TCTTTAGAAG ATAGTCTTAT GCGCCTATTT ATTTCTGATA GGATTGCTAA AATTATGGAT AGCTTAGGTC TTAAAGAAGG GGAGATGATA CAGCATAGTA TGATAACAAG ATCCATAGAA AGGGCTCAGA AAAAGGTAGA GCAGAATAAC TATGCTTACC GTAAGCGTTT GTTGGAGTAT GATAATGAGC TTAATAAACA GCGAGAAATC ATCTACAGAC GTAGAAGAGA TGCACTTTTG GGGCATAGGC TAGGCGCAGA GGTAAATGCT ATGTTGTTTG AAGTAGCAAA GAGTTCAGTT ATGCAACAAG GGGTAAAAGC AAATTATCAT GTGCTAGCAA CAAAATTCTC TTACATAACT GGTACGCTAC CCCCCATCAC AGAAGAGGAG TTCCACACCT ACGATATACA AAAAATAACG GATATTATTT ATCAGGCATT TTTATCTAGC TATATGAATA GACTGGCTGT ATTTAAGGAA CAAGGCATAG CTGTACAGAT GAATCTACCA GATCATATAG CAGATATTAG AGCTGAATAT TTATCCTTTA GCTTTTCAGA TAGTGAAAGA CGTTTAGAAG TACCAGTTAA AATAGCTGAC TTTATGGATA ATGCAGGAGA AGCTATTTTG AAATCGTTAG AGAGGGTGGC CATTATCTAT TACTTAGATC GATATTGGCA AGAGCATTTA CGTTACATGG ATGAACTTAG GCACTCTGTA CAAAATGCAT CTTATGAACA GAAAGATCCG TTGCTTATAT ATAAATTTGA ATCGTATGCT CTATTTTCTA CTATGATTGC CCGGGCAAAT GAATCAATTA TTACCTACTT ACTAAAAGCT AACTTATTGC TCTATAAGGC GAGCGACGAG AAGCCTAAGA TGGTAGAGAA AAATAAAAGA ATAGAACTAG AAGAAAGCAA ACAAGATATT ATAAGTTTAC TGAGAGAAAG GGCTAGCAAC TCTTCTGAAG AAATATTAAA ACCTCAGCCT ATTAAGTCTC AAAAGATAGC TAACAGAAAT GAGCGAGTAA CTGTGCAGTA TGAAGATGGG ACTATAAAAG AAAATGTTAA ATTCAAAAGT GTAGAAGAAG ATATAGCTAA TGGAAAATGT ATATTGCTTG AAACAAGATA A
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Protein sequence | MLKLFTKLFG TKSERDLKSI RPYVEKINLE YEKLVSLTND ELRKKTDSLK QYIKVETQEF IGELEIRERQ LEATTQLTPK EVEDLYIQIS RIKEQYNTQL EKVLLDILPQ AFAIVKETAR RFKENEQLIV TATGYDRELA ITEKHIDIEG DQAIWKNQWE VTGHLLTWDM VHYDEQLIGG VILHKGKIAE MATGEGKTLV ATLPTFLNAL VGKGVHIVTV NEYLAKRDAA WMKPIYQFHG FTVACIEETS PYSAARREAY QADITYGTNN EFGFDYLRDN MASQQEEVVQ REHHYAIVDE VDSVLIDDAR TPLIISGPVE KGNEQEYITF NPRIKRLYEA QKQIVNQFLQ EAKSQMVAGK NDEAGLPLFR AYRGLPKYKP LIKYLSEPGV KQLLHKTENY YIQDNSRMMP EADEPLLFTI DEKHNTVELT EKGLEYITQQ GEDPDFFILP DTATAVGEIE SDAGLDNLEK EQKKQILAQE YAIKSQRIHA VQQLLKAYAL FEKDIDYILV DGKAKIVDEQ TGRVLEGRRY SDGLHQAIEA KEEIKIEKAS QTYATITLQN YFRLYHKLAG MTGTAETEAG EFYDIYHLDV VVTPTHKPVV REDKDDKVYK TVREKFNAII EEITVLANQG RPVLVGTTSV EISELVSKML NLRKIKHQVL NAKHHQKEAE IVAEAGKPGT VTIATNMAGR GTDIKLSPEA KAAGGLAIIG TERHESRRVD RQLRGRAGRQ GDVGSSQFFV SLEDSLMRLF ISDRIAKIMD SLGLKEGEMI QHSMITRSIE RAQKKVEQNN YAYRKRLLEY DNELNKQREI IYRRRRDALL GHRLGAEVNA MLFEVAKSSV MQQGVKANYH VLATKFSYIT GTLPPITEEE FHTYDIQKIT DIIYQAFLSS YMNRLAVFKE QGIAVQMNLP DHIADIRAEY LSFSFSDSER RLEVPVKIAD FMDNAGEAIL KSLERVAIIY YLDRYWQEHL RYMDELRHSV QNASYEQKDP LLIYKFESYA LFSTMIARAN ESIITYLLKA NLLLYKASDE KPKMVEKNKR IELEESKQDI ISLLRERASN SSEEILKPQP IKSQKIANRN ERVTVQYEDG TIKENVKFKS VEEDIANGKC ILLETR
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