| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_0789 |
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| Symbol | |
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| ID | 6376764 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | + |
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| Start bp | 1004896 |
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| End bp | 1006335 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 642681933 |
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| Product | hypothetical protein |
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| Protein accession | YP_001957896 |
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| Protein GI | 189502179 |
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| COG category | [K] Transcription |
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| COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
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| TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.545015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAAAT TACGTTTAAC CCAAAAACTT ACTCAAAAGT TAACCCCTCA ACAAATTCAA
TTAGTAAAGC TTTTACAAAT TCCTTCCATA GATATTAATG CACGTATACA GCAAGAATTA
GCAGAAAACC CTGTTTTAGA ACCAGCTAAT GATAATGTTG AGTATCTGCA AGAAGCTGAA
GATAATTCTG CTATAGATAC GATGACTGTT GGTTATATAG ATGAGTTACC ACAAAAAAAC
TACCTTACAT ATCGCGATTA TGAGGCAGAA GAACGATGGC TCAGAAAGGA AGCTTCAGTT
CCCAATAGAT ATTCTTTGCA AGAACAGCTA TTAGAACAAT TAGAAATGCT TCGTTTGGAT
GAAGGTCAAC ATAAGATTGG TGAATACCTT ATTGGAAGTT TAGAAACAGA TGGTTATATA
CGGCGTGATT TGGCAGCGCT TGCTAATGAT CTTTTATTAA CACAATATAT TCAGACCAAT
GAAACAGAAG TAGAAACAAT ACTTAAAAAA ATACAGACAT TTGATCCTCC TGGAATCGGC
GCTAGAAGCT TACAAGAATG CTTGCTTATT CAGCTAAATA GGCAACCATC TAAGCCTGTA
CGTAATATGG CTATTCAAAT CTTAAATCAG ACTTTTGAAT TGTTTACCAA AAAACATTAT
TCCCAAATTA TTAAAAAACT TGCCATAGAA GATCAGGAAC TTTTTAAGGA AGCGTTAGAA
CTTATTGCAA AGCTAAATCC TAAACCAGGT GGAACATTAG GTTCAGATAT TCAACAAAAC
CAGATTTTAT ATCCAGATTT TCTAGTCACT AAGCATAACC AACAATTGGA GGTACGGTTG
AATGCTTATA ATACACCTGA GCTTAGACTG AGCAGGAGCT ATATACACAT TTTAGAAACC
TCTCAGAAAC TAGGTAAAGA CAAAAAAAAG AGTCCCAGCT TACAAGCAGC TTCTTCTTTT
GTTAAACAAA AAGCAGAGTC AGCAAAGTGG TTTATAGAAG CATTGAACCA GCGTAAAAAG
ACGCTTTTGC GTACCATGCA GGCTATAGTA CAGTTGCAAT ACGATTTTTT TATGGAAGAA
GATGAAAGTA AGCTTAAACC GATGATATTA AAAGATGTAG CAAAAATTAT TGAAATGGAT
ATTTCTACAG TTTCTAGAAT TGTTAATAAT AAATCTGTGC AAACACAGTT TGGCATTTAC
CCTCTTAAAT TCTTCTTTAC TGAAGCTATC AGTACTACTA TGGGAGAAGA TGTAAGTAGT
AAAGCTGTAA AACAAGCATT GCTAGAACTT ATTCAACAAG AGAGCAAACA ACAACCTTAT
GCAGATGAGC AACTTACTGC TATGCTTGTT GATAAGGGTT ATCATATAGC ACGTCGTACT
GTAGCTAAAT ATAGGGAGCA GCTTAATATG CCTGTAGCTA GGTTAAGGAA AGAACTGTAG
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| Protein sequence | MQKLRLTQKL TQKLTPQQIQ LVKLLQIPSI DINARIQQEL AENPVLEPAN DNVEYLQEAE
DNSAIDTMTV GYIDELPQKN YLTYRDYEAE ERWLRKEASV PNRYSLQEQL LEQLEMLRLD
EGQHKIGEYL IGSLETDGYI RRDLAALAND LLLTQYIQTN ETEVETILKK IQTFDPPGIG
ARSLQECLLI QLNRQPSKPV RNMAIQILNQ TFELFTKKHY SQIIKKLAIE DQELFKEALE
LIAKLNPKPG GTLGSDIQQN QILYPDFLVT KHNQQLEVRL NAYNTPELRL SRSYIHILET
SQKLGKDKKK SPSLQAASSF VKQKAESAKW FIEALNQRKK TLLRTMQAIV QLQYDFFMEE
DESKLKPMIL KDVAKIIEMD ISTVSRIVNN KSVQTQFGIY PLKFFFTEAI STTMGEDVSS
KAVKQALLEL IQQESKQQPY ADEQLTAMLV DKGYHIARRT VAKYREQLNM PVARLRKEL
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