Gene Aasi_0702 details

Gene Information

• Locus tag: Aasi_0702
• Symbol: prfA
• ID: 6376921
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Candidatus Amoebophilus asiaticus 5a2
• Kingdom: Bacteria
• Replicon accession: NC_010830
• Strand: +
• Start bp: 894245
• End bp: 895312
• Gene Length: 1068 bp
• Protein Length: 355 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 642681853
• Product: peptide chain release factor 1
• Protein accession: YP_001957820
• Protein GI: 189502103
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0216] Protein chain release factor A
• TIGRFAM ID: [TIGR00019] peptide chain release factor 1

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 20
• Fosmid unclonability p-value: 0.759041
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGATTGATA AACTAGAAGC TATAGAAAAA AAGTATGAAG AGGTTAGTAA GCAGATCGTT 
GATCCGTCCA TTATGGCTGA TATGAAACAG TATGCTAGCC TCAACAAGAC ATATAAAGAA 
CTTTCTAAAA TTGTTGATGT ATATACAGTA TATAAAAGTA ATTTAGCTAA TCTTGAAAGT 
GCAAAAACAT TACTAAGTAT AGAAAAAGAT GCAGCATTTA GAGATTTAGC CAAAGAGGAG 
ATAGATAGCT TAGAATTACA AAAAACGCAA TTAGAAGAAG ATTTAAAGTT TTTGCTTTTA 
CCTAAAGATC CTAATGATAG TAAGAATGTT ATATTAGAAA TTAGAGCAGG TACAGGTGGA 
GATGAAGCAG GTATATTTGC TGGTGATCTA TTTAGGATGT ATAGTCGGTT TGCAGAGAAA 
ATGCAATGGA AATTGTCAAT TATTGAAGAA GTGGAGAGTA CTTCTGGAGG CTATAAAGAA 
ATTATCTGTA GCATAGCGGG CGAAGGAGCC TATGGAATGT TAAAATATGA ATCAGGTGTA 
CACCGTGTGC AGCGTGTACC CGCTACAGAA ACGCAAGGTC GTATACATAC CTCAGCAGCT 
AGTGTTGTAG TATTGCCAGA AATGGATGAA GTGGAAGTAG ATCTAGATAT GAACGATATC 
CGAAAGGATA CATTCTGTTC TTCTGGTCCT GGAGGGCAGT CTGTTAATAC AACCTATTCT 
GCTATAAGGC TTACGCATAT ACCTACAGGC ATTGTAGTGA GCTGTCAAGA TGAAAAATCT 
CAGATTAAAA ACTTAGAAAA AGCGCTTAAA GTATTGCGTG CTCGCTTATA TGAGCAAGAA 
CTTAAGAAAC AGCAAGATGC TATTGGAGCA GAAAGAAGAT CGATGGTAAA AAGTGGTGAC 
CGTTCTGATA AGATACGTAC TTATAATTTC CCACAAGGTA GAGTTACAGA CCATCGGATA 
GGTTATACCA TTCATAATTT GCCTGCTGTA ATGGATGGAG CTGTTGGAGA TTTAATAGAA 
GCATTACAAT TGGCAGATAA TGCTGAGAGA TTACAACAAG GAGCGTAA 

 

Protein sequence

MIDKLEAIEK KYEEVSKQIV DPSIMADMKQ YASLNKTYKE LSKIVDVYTV YKSNLANLES 
AKTLLSIEKD AAFRDLAKEE IDSLELQKTQ LEEDLKFLLL PKDPNDSKNV ILEIRAGTGG 
DEAGIFAGDL FRMYSRFAEK MQWKLSIIEE VESTSGGYKE IICSIAGEGA YGMLKYESGV 
HRVQRVPATE TQGRIHTSAA SVVVLPEMDE VEVDLDMNDI RKDTFCSSGP GGQSVNTTYS 
AIRLTHIPTG IVVSCQDEKS QIKNLEKALK VLRARLYEQE LKKQQDAIGA ERRSMVKSGD 
RSDKIRTYNF PQGRVTDHRI GYTIHNLPAV MDGAVGDLIE ALQLADNAER LQQGA