Gene Aasi_0639 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0639 
Symbol 
ID6376521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp820986 
End bp821771 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content32% 
IMG OID642681793 
Producthypothetical protein 
Protein accessionYP_001957765 
Protein GI189502048 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.7148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT TTATCAAAAT TACATTTGTT TTTATGTTTT TGTTGTTAGC AGGCTTTAAT 
AATTCTAACA ATAAAGGTTA CAAGGTAAGA AAAATTATCA TTGATGCCGG TCATGGCGGC
AAAGATTCAG GAGCATTAGG TCGATTTTCT AAAGAAAAGG ATATAGCACT TCAAATAGCT
TTAGAATTAG GAAAGCTTAT TAAAAAAAAT ATGCGAGATG TAACTGTACT GTATACTCGC
CAAAAAGATG AGTTTATTCC TATATACCAA AGAGCCCATA TAGCTAATAA AAATAATGCG
GACGTCTTTA TATCTATCCA TTGTAATGCA GCAGAGAAAA ATAAATCTGC ACATGGCATA
GAGATTTTTA CAATGGGGTT AGAAACCAGC AGTAAAAACT TAGCGGTTAC AAAAAGAGAA
AATTCCGTCA TTTTAATAGA AGATAACCAT AAAGAACATT ACCAAGGTTT TGATCCTAAA
TCTCCTGAAT CTCATATATT ATTTTCTCTA TACCAAAATG CATACACTGA AAATAGTCTA
AAGCTGGCAC AAAATATTGA GGCTGGATTT AAGCAGCATA CCGGTAGAAA AAGTCGAGGA
GTTAAACAAG ACGGACTTTT AGTATTATGG CAAACCACCT CACCTAGCGT TCTAGTAGAA
GTAGGTTTCA TAAGCAATGC AGAAGAAGAA AAATATTTAA ATCAAAAGAC AAGCCAAACT
AAAATAGCTA CTGCAATTTT TGAAGGATTT AAGAAATACA AGTATGACAT AGAGCACTAT
AAGTAA
 
Protein sequence
MKIFIKITFV FMFLLLAGFN NSNNKGYKVR KIIIDAGHGG KDSGALGRFS KEKDIALQIA 
LELGKLIKKN MRDVTVLYTR QKDEFIPIYQ RAHIANKNNA DVFISIHCNA AEKNKSAHGI
EIFTMGLETS SKNLAVTKRE NSVILIEDNH KEHYQGFDPK SPESHILFSL YQNAYTENSL
KLAQNIEAGF KQHTGRKSRG VKQDGLLVLW QTTSPSVLVE VGFISNAEEE KYLNQKTSQT
KIATAIFEGF KKYKYDIEHY K