Gene Aasi_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_0620 
Symbol 
ID6376356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand- 
Start bp801117 
End bp801770 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content36% 
IMG OID642681773 
Producthypothetical protein 
Protein accessionYP_001957747 
Protein GI189502030 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACAAG AAGAACGTTA TAATGCAGTT ATAGCTTACT TTACTAGAGA ACCTGAAATT 
AAAACAGAGT TACATTATGA AAATGCTTTT CAGTTGATGA TTGCTGTCGT TTTAAGTGCA 
CAATGTACAG ACAAGCGCGT TAATCTAGTA ACTCCTCAAC TTTTCGAAGC ATTTCCTACG 
CCTATAGAAT TAGCTTACAG TACCTTTGAA GAAGTTTTTC CCTACATTAA ATCCATTTCT 
TATCCAAACA ATAAAACCAA GTACCTGATT AAAGCTGCAC AAGACATTGT AGAGAAATTC 
CAAGGGCAAG TTCCAGAAGA TGTAGAATCT TTAAAAACTT TAGCTGGAGT AGGTAGAAAA 
TCAGCTCATG TGATTGCTGC TGTTTTATAT AATACGCCTA CCTTAGGCGT AGATACCCAT 
GTAATGCGTG TTTCCAAAAG AATAGGGTTA GTAGACGATA AAGCAAAAAC ACCTCTTGCC 
ATAGAAAAGC AGCTAGTACA AAACCTGTCT GATATATATA TAGGCAAGCT CAACCATTGG 
CTTGTTATAC ATGGAAGGTA TACCTGCTTA GCTCGAAAAC CAAAGTGTAG CTCATGTGCG 
CTTACTACCT GTTGCCTCTA TTTTAATATC CATCACAACA AAGCTGTTAT ATAA
 
Protein sequence
MIQEERYNAV IAYFTREPEI KTELHYENAF QLMIAVVLSA QCTDKRVNLV TPQLFEAFPT 
PIELAYSTFE EVFPYIKSIS YPNNKTKYLI KAAQDIVEKF QGQVPEDVES LKTLAGVGRK 
SAHVIAAVLY NTPTLGVDTH VMRVSKRIGL VDDKAKTPLA IEKQLVQNLS DIYIGKLNHW 
LVIHGRYTCL ARKPKCSSCA LTTCCLYFNI HHNKAVI